BLASTX nr result

ID: Coptis23_contig00031654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031654
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457856.1| hypothetical protein SORBIDRAFT_03g016088 [S...   107   1e-21
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...   106   2e-21
gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa...   106   2e-21
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...   105   3e-21
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...   105   5e-21

>ref|XP_002457856.1| hypothetical protein SORBIDRAFT_03g016088 [Sorghum bicolor]
           gi|241929831|gb|EES02976.1| hypothetical protein
           SORBIDRAFT_03g016088 [Sorghum bicolor]
          Length = 142

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/93 (52%), Positives = 67/93 (72%)
 Frame = -2

Query: 314 FLRILLNYVRGPTSFEYLKIVGSRVCTTFKEAAELRGLLECDNSIHECLLEAASIHMPSA 135
           +LR+LLN+VRGPTSFE LK V   +C+TF+E+ E RGL+E DN+I +CL+E A+  MP A
Sbjct: 17  YLRVLLNHVRGPTSFEDLKTVAGILCSTFRESCEKRGLIETDNTIDDCLVEQATFQMPYA 76

Query: 134 LRNLFGSILVYCNPIGVRDLWNEFHPYMLEDYA 36
           LR LF ++LV+C    +R LW +    M EDY+
Sbjct: 77  LRRLFATVLVHCEATRIRALWEKHKESMAEDYS 109


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = -2

Query: 314  FLRILLNYVRGPTSFEYLKIVGSRVCTTFKEAAELRGLLECDNSIHECLLEAASIHMPSA 135
            +LR+LL +V G TSFE+L+ V   VC++F+EAAE RGL+E DN++ ECL EA    MPS+
Sbjct: 815  YLRVLLTHVTGATSFEHLRTVDGEVCSSFREAAEKRGLIEADNTLDECLTEAEVFQMPSS 874

Query: 134  LRNLFGSILVYCNPIGVRDLWNEFHPYMLEDY 39
            LR LF +ILV+C P  V  LWN+    ML+DY
Sbjct: 875  LRRLFATILVFCEPSDVLGLWNKHLEGMLDDY 906


>gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa Japonica Group]
          Length = 1416

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = -2

Query: 314  FLRILLNYVRGPTSFEYLKIVGSRVCTTFKEAAELRGLLECDNSIHECLLEAASIHMPSA 135
            +LR+LL +V G TSFE+L+ V   VC++F+EAAE RGL+E DN++ ECL EA    MPS+
Sbjct: 815  YLRVLLTHVTGATSFEHLRTVDGEVCSSFREAAEKRGLIEADNTLDECLTEAEVFQMPSS 874

Query: 134  LRNLFGSILVYCNPIGVRDLWNEFHPYMLEDY 39
            LR LF +ILV+C P  V  LWN+    ML+DY
Sbjct: 875  LRRLFATILVFCEPSDVLGLWNKHLEGMLDDY 906


>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/93 (52%), Positives = 67/93 (72%)
 Frame = -2

Query: 314  FLRILLNYVRGPTSFEYLKIVGSRVCTTFKEAAELRGLLECDNSIHECLLEAASIHMPSA 135
            +LR+LLN+VRGPTSFE LK V   +C+TF+E+ E RGL+E DN+I +CL+EAA+  MP A
Sbjct: 756  YLRVLLNHVRGPTSFEDLKTVAGILCSTFRESCEKRGLIETDNTIDDCLVEAATFQMPYA 815

Query: 134  LRNLFGSILVYCNPIGVRDLWNEFHPYMLEDYA 36
            LR LF ++LV+C    +  LW +    M EDY+
Sbjct: 816  LRRLFATVLVHCEATRICALWEKHKESMAEDYS 848


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
            gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
            Japonica Group]
          Length = 1575

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/92 (53%), Positives = 66/92 (71%)
 Frame = -2

Query: 314  FLRILLNYVRGPTSFEYLKIVGSRVCTTFKEAAELRGLLECDNSIHECLLEAASIHMPSA 135
            +LR+LL +V G TSFE+L+ V   VC++F+EAAE RGL+E DN++ ECL +A    MPS+
Sbjct: 974  YLRVLLTHVTGATSFEHLRTVDGEVCSSFREAAEQRGLIEADNTLDECLTKAEVFQMPSS 1033

Query: 134  LRNLFGSILVYCNPIGVRDLWNEFHPYMLEDY 39
            LR LF +ILV+C P  V  LWN+    ML+DY
Sbjct: 1034 LRRLFATILVFCEPSDVLGLWNKHLEGMLDDY 1065


Top