BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031641
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinu...   318   8e-85
ref|XP_003528447.1| PREDICTED: protein Brevis radix-like 2-like ...   306   2e-81
ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isofo...   305   6e-81
emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]   305   6e-81
ref|XP_003549025.1| PREDICTED: protein Brevis radix-like 2-like ...   299   3e-79

>ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223539426|gb|EEF41016.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 372

 Score =  318 bits (814), Expect = 8e-85
 Identities = 161/219 (73%), Positives = 182/219 (83%), Gaps = 6/219 (2%)
 Frame = -2

Query: 640 MLTCIACTKQVGGGGSIHKPAGEEDDE-----PNTKHAIKTLTSQIKDMALKASGAYRHC 476
           MLTCIAC+KQ+  G S+H+   EEDD+     P T+  IK +T+QIKDMA+KASGAYR+C
Sbjct: 1   MLTCIACSKQLNNG-SLHQREREEDDDDAMETPRTRQTIKAITAQIKDMAIKASGAYRNC 59

Query: 475 RPCXXXXXXXXXXXNYADSEALSASERFHYSYRRTGSSNSTPKLWGKEIESRLKGLSSS- 299
           +PC            YA+S+A+S S RFH SYRRTGSSNSTP+LWGKE+E+RLKGLSSS 
Sbjct: 60  KPCSGSSNNNHNEN-YAESDAISDSARFHCSYRRTGSSNSTPRLWGKEMEARLKGLSSSG 118

Query: 298 EGTPTSMSGRVDSVVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNK 119
           EGTP S+SGR +SVV  MEEEE KEW+AQVEPGVLITFVSLPQGGNDLKRIRFSREMFNK
Sbjct: 119 EGTPASVSGRAESVV-FMEEEEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNK 177

Query: 118 WQAQRWWAENYDKVMELYNVQRFNHQAIPLPTTPRSEDE 2
           WQAQRWWAENYDKVMELYNVQRFNHQA+PLPT PRSEDE
Sbjct: 178 WQAQRWWAENYDKVMELYNVQRFNHQAVPLPTPPRSEDE 216



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
 Frame = -2

Query: 430 YADSEALSASERFHYSYRRTGSSNSTPKLWGKEIESRLKGLSSSEGTPTSMSGR----VD 263
           Y+ S++L         Y  +    STPKL    I       SS  G+  + S R      
Sbjct: 248 YSSSDSLDHHPMQSRQYYDSVGLASTPKL--SSISGAKTEASSVGGSARTSSSRDADHSG 305

Query: 262 SVVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYD 83
            + V    +   EW+ Q EPGV IT  +LP G  +L+R+RFSRE F +  A+ WW EN  
Sbjct: 306 ELSVSNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWDENRA 365

Query: 82  KVMELY 65
           ++ E Y
Sbjct: 366 RIQEQY 371


>ref|XP_003528447.1| PREDICTED: protein Brevis radix-like 2-like [Glycine max]
          Length = 368

 Score =  306 bits (785), Expect = 2e-81
 Identities = 158/215 (73%), Positives = 177/215 (82%), Gaps = 2/215 (0%)
 Frame = -2

Query: 640 MLTCIACTKQVGGGGSIHKPAGEED-DEPNTKHAIKTLTSQIKDMALKASGAYRHCRPCX 464
           MLTCIACTKQ+  G S+ +  GEE    P+TK AIK LTSQIKDMA+KASGAY+ CRPC 
Sbjct: 1   MLTCIACTKQLNNG-SLRQEEGEEAVHTPSTKQAIKALTSQIKDMAVKASGAYKSCRPCS 59

Query: 463 XXXXXXXXXXNYADSEALSASERFHYSYRRTGSSNSTPKLWGKEIES-RLKGLSSSEGTP 287
                      YADS+  S S RF+++YRRTGSSNSTP++WGKE+E+ R+KGLSS EGTP
Sbjct: 60  GSSNGNRNRK-YADSDMGSDSARFNWAYRRTGSSNSTPRMWGKEVENGRVKGLSSGEGTP 118

Query: 286 TSMSGRVDSVVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ 107
            S+SGR +SVV  MEE+E KEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ
Sbjct: 119 ASVSGRTESVV-FMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ 177

Query: 106 RWWAENYDKVMELYNVQRFNHQAIPLPTTPRSEDE 2
           RWWAENYDKVMELYNVQRFN QA+PLPT PRSEDE
Sbjct: 178 RWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDE 212



 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
 Frame = -2

Query: 430 YADSEALSASERFHYSYRRTGSSNSTPKLWGKEIESRLKGLSSSEGTP-TSMSGRVDS-- 260
           Y+ S++L   +   +    T    STP L    I +     SS +G+  TS SG   S  
Sbjct: 245 YSSSDSLDRHQMQPHPCYETSGLASTPNL--SNISAPKTERSSLDGSVRTSSSGEDHSGE 302

Query: 259 VVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDK 80
             +    +   EW+ Q EPGV IT  +LP G  +L+R+RFSRE F +  A+ WW EN  +
Sbjct: 303 FSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRAR 362

Query: 79  VMELY 65
           + E Y
Sbjct: 363 IQEQY 367


>ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isoform 2 [Vitis vinifera]
           gi|297743026|emb|CBI35893.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score =  305 bits (781), Expect = 6e-81
 Identities = 158/216 (73%), Positives = 176/216 (81%), Gaps = 3/216 (1%)
 Frame = -2

Query: 640 MLTCIACTKQVGGGGSIHKPA---GEEDDEPNTKHAIKTLTSQIKDMALKASGAYRHCRP 470
           MLTCIAC+KQV G  S+H+     GE    P+TKHAIK LT+QIKDMALKASGAYR+C+P
Sbjct: 1   MLTCIACSKQVSGR-SLHEQEEGEGEAVATPSTKHAIKALTAQIKDMALKASGAYRNCKP 59

Query: 469 CXXXXXXXXXXXNYADSEALSASERFHYSYRRTGSSNSTPKLWGKEIESRLKGLSSSEGT 290
           C            YADSE+ S S RFH SYRRTGSS+STP+L GKE+E+R K LSS EGT
Sbjct: 60  CSGSSGQNQDRN-YADSESASDSARFHCSYRRTGSSSSTPRLLGKEMEARSKRLSSGEGT 118

Query: 289 PTSMSGRVDSVVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQA 110
           P S+SGR +SVV  MEE+E KEWIAQVEPGVLITFVS+PQGGNDLKRIRFSRE+FNKWQA
Sbjct: 119 PASVSGRAESVV-FMEEDEPKEWIAQVEPGVLITFVSMPQGGNDLKRIRFSREIFNKWQA 177

Query: 109 QRWWAENYDKVMELYNVQRFNHQAIPLPTTPRSEDE 2
           QRWWAENYDKVMELYNVQRFN QA+PLPT PRSEDE
Sbjct: 178 QRWWAENYDKVMELYNVQRFNRQAVPLPTPPRSEDE 213



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = -2

Query: 430 YADSEALSASERFHYSYRRTGSSNSTPKLWG-KEIESRLKGLSSSEGTPTSMSG-RVDSV 257
           Y+ S++L         Y  +    STPKL      ++    + +S  T +S    R   +
Sbjct: 247 YSSSDSLDHHPLQSRHYYDSAGLASTPKLSSISGAKTETSSIDASVRTSSSREADRSGEL 306

Query: 256 VVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKV 77
            +    +   EW+ Q EPGV IT  +LP G  +L+R+RFSRE F +  A+ WW EN  ++
Sbjct: 307 SISNASDMETEWVEQDEPGVYITIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARI 366

Query: 76  MELY 65
            E Y
Sbjct: 367 QEQY 370


>emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]
          Length = 363

 Score =  305 bits (781), Expect = 6e-81
 Identities = 158/216 (73%), Positives = 176/216 (81%), Gaps = 3/216 (1%)
 Frame = -2

Query: 640 MLTCIACTKQVGGGGSIHKPA---GEEDDEPNTKHAIKTLTSQIKDMALKASGAYRHCRP 470
           MLTCIAC+KQV G  S+H+     GE    P+TKHAIK LT+QIKDMALKASGAYR+C+P
Sbjct: 1   MLTCIACSKQVSGR-SLHEQEEGEGEAVATPSTKHAIKALTAQIKDMALKASGAYRNCKP 59

Query: 469 CXXXXXXXXXXXNYADSEALSASERFHYSYRRTGSSNSTPKLWGKEIESRLKGLSSSEGT 290
           C            YADSE+ S S RFH SYRRTGSS+STP+L GKE+E+R K LSS EGT
Sbjct: 60  CSGSSGQNQDRN-YADSESASDSARFHCSYRRTGSSSSTPRLLGKEMEARSKRLSSGEGT 118

Query: 289 PTSMSGRVDSVVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQA 110
           P S+SGR +SVV  MEE+E KEWIAQVEPGVLITFVS+PQGGNDLKRIRFSRE+FNKWQA
Sbjct: 119 PASVSGRAESVV-FMEEDEPKEWIAQVEPGVLITFVSMPQGGNDLKRIRFSREIFNKWQA 177

Query: 109 QRWWAENYDKVMELYNVQRFNHQAIPLPTTPRSEDE 2
           QRWWAENYDKVMELYNVQRFN QA+PLPT PRSEDE
Sbjct: 178 QRWWAENYDKVMELYNVQRFNRQAVPLPTPPRSEDE 213



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = -2

Query: 430 YADSEALSASERFHYSYRRTGSSNSTPKLWG-KEIESRLKGLSSSEGTPTSMSG-RVDSV 257
           Y+ S++L         Y  +    STPKL      ++    + +S  T +S    R   +
Sbjct: 239 YSSSDSLDHHPLQSRHYYDSAGLASTPKLSSISGAKTDTSSIDASVRTSSSREADRSGEL 298

Query: 256 VVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKV 77
            +    +   EW+ Q EPGV IT  +LP G  +L+R+RFSRE F +  A+ WW EN  ++
Sbjct: 299 SISNASDMETEWVEQDEPGVYITIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARI 358

Query: 76  MELY 65
            E Y
Sbjct: 359 QEQY 362


>ref|XP_003549025.1| PREDICTED: protein Brevis radix-like 2-like [Glycine max]
          Length = 371

 Score =  299 bits (766), Expect = 3e-79
 Identities = 156/218 (71%), Positives = 175/218 (80%), Gaps = 5/218 (2%)
 Frame = -2

Query: 640 MLTCIACTKQVGGGGSIHKPAGEED---DEPNTKHAIKTLTSQIKDMALKASGAYRHCRP 470
           MLTCIACTKQ+  G S+ +   EE      P+TK AIK LTSQIKDMA+KASGAY+ CRP
Sbjct: 1   MLTCIACTKQLNNG-SLRQEEEEEAVSVHTPSTKQAIKALTSQIKDMAVKASGAYKSCRP 59

Query: 469 CXXXXXXXXXXXNYADSEALSASERFHYSYRRTGSSNSTPKLWGKEIES--RLKGLSSSE 296
           C            YADS+  S S RF+++YRRTGSSNSTP++WGKE+E+  R+KGLSS E
Sbjct: 60  CSGSSNGNRNRK-YADSDIGSDSARFNWAYRRTGSSNSTPRMWGKEVENGGRVKGLSSGE 118

Query: 295 GTPTSMSGRVDSVVVLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKW 116
           GTP S+SGR +SVV  MEE+E KEWIAQVEPGVLITFVSL QGGNDLKRIRFSREMFNKW
Sbjct: 119 GTPASVSGRTESVV-FMEEDEPKEWIAQVEPGVLITFVSLTQGGNDLKRIRFSREMFNKW 177

Query: 115 QAQRWWAENYDKVMELYNVQRFNHQAIPLPTTPRSEDE 2
           QAQRWWAENYDKVMELYNVQRFN QA+PLPT PRSEDE
Sbjct: 178 QAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDE 215



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
 Frame = -2

Query: 430 YADSEALSASERFHYSYRRTGSSNSTPKLWGKEI-ESRLKGLSSSEGTPTSMSGRVDSVV 254
           Y+ S++L   +   +    T    STP L      ++    L +S  T +S         
Sbjct: 248 YSSSDSLDRHQIQPHPCYETSGLTSTPNLSNISAPKTERSSLDASVRTSSSGEDHSGEFS 307

Query: 253 VLMEEEEHKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVM 74
           +    +   EW+ Q EPGV IT  +LP G  +L+R+RFSRE F +  A+ WW EN  ++ 
Sbjct: 308 ISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQ 367

Query: 73  ELY 65
           E Y
Sbjct: 368 EQY 370