BLASTX nr result

ID: Coptis23_contig00031634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031634
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522770.1| conserved hypothetical protein [Ricinus comm...   103   2e-20
ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...    99   3e-19
ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
emb|CAN76517.1| hypothetical protein VITISV_033675 [Vitis vinifera]    98   6e-19
ref|XP_004150300.1| PREDICTED: uncharacterized protein LOC101209...    95   7e-18

>ref|XP_002522770.1| conserved hypothetical protein [Ricinus communis]
           gi|223538008|gb|EEF39621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/75 (69%), Positives = 56/75 (74%)
 Frame = -1

Query: 226 MNHGDLNKVWEIKALKKPGEDEARKMLEKIAK*VQPIMKKHNWRVKRLSEMCPSNPAXXX 47
           MN GDLNKVWEIKALKKPGE+EA++MLEKIAK VQPIM+KH WRVK LSE CP NPA   
Sbjct: 1   MNVGDLNKVWEIKALKKPGEEEAKRMLEKIAKQVQPIMRKHKWRVKVLSEFCPKNPALLG 60

Query: 46  XXXXXXXXXXLRLRR 2
                     LRLRR
Sbjct: 61  LNVGGGVHVKLRLRR 75


>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/75 (65%), Positives = 55/75 (73%)
 Frame = -1

Query: 226 MNHGDLNKVWEIKALKKPGEDEARKMLEKIAK*VQPIMKKHNWRVKRLSEMCPSNPAXXX 47
           MN GDLNKVWE+K LKK GEDEARK+LE++AK VQPIM+KH WRVK LSE CP+NPA   
Sbjct: 1   MNLGDLNKVWEVKPLKKAGEDEARKILERVAKHVQPIMRKHKWRVKLLSEFCPNNPALLG 60

Query: 46  XXXXXXXXXXLRLRR 2
                     LRLRR
Sbjct: 61  LNVGGGIHVKLRLRR 75


>ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|222860422|gb|EEE97969.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/75 (66%), Positives = 56/75 (74%)
 Frame = -1

Query: 226 MNHGDLNKVWEIKALKKPGEDEARKMLEKIAK*VQPIMKKHNWRVKRLSEMCPSNPAXXX 47
           MN  DLNKVWEIKALKKPGE+EAR+ML+KIAK VQPIM+KHNWRVK LSE CP+N +   
Sbjct: 1   MNLSDLNKVWEIKALKKPGEEEARRMLDKIAKQVQPIMRKHNWRVKLLSEFCPNNRSLLG 60

Query: 46  XXXXXXXXXXLRLRR 2
                     LRLRR
Sbjct: 61  LNVGGGVHVKLRLRR 75


>emb|CAN76517.1| hypothetical protein VITISV_033675 [Vitis vinifera]
          Length = 354

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/75 (64%), Positives = 55/75 (73%)
 Frame = -1

Query: 226 MNHGDLNKVWEIKALKKPGEDEARKMLEKIAK*VQPIMKKHNWRVKRLSEMCPSNPAXXX 47
           MN GDLNKVWE++ LKK GEDEARK+LE++AK VQPIM+KH WRVK LSE CP+NPA   
Sbjct: 1   MNLGDLNKVWEVRPLKKAGEDEARKILERVAKHVQPIMRKHKWRVKLLSEFCPNNPALLG 60

Query: 46  XXXXXXXXXXLRLRR 2
                     LRLRR
Sbjct: 61  LNVGGGIHVKLRLRR 75


>ref|XP_004150300.1| PREDICTED: uncharacterized protein LOC101209563, partial [Cucumis
           sativus] gi|449510535|ref|XP_004163693.1| PREDICTED:
           uncharacterized LOC101209563, partial [Cucumis sativus]
          Length = 423

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/75 (65%), Positives = 53/75 (70%)
 Frame = -1

Query: 226 MNHGDLNKVWEIKALKKPGEDEARKMLEKIAK*VQPIMKKHNWRVKRLSEMCPSNPAXXX 47
           M+ GDLNKVWEIKALKK GE EA+ MLE+IAK VQPIM+KH WRVK LSE CP NPA   
Sbjct: 10  MDVGDLNKVWEIKALKKAGEKEAKDMLERIAKQVQPIMRKHKWRVKVLSEFCPKNPALLG 69

Query: 46  XXXXXXXXXXLRLRR 2
                     LRLRR
Sbjct: 70  LNVGRGIHVKLRLRR 84


Top