BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031633
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         272   5e-71
ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   271   1e-70
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]         269   4e-70
ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|3555146...   260   2e-67
ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]         259   2e-67

>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  272 bits (695), Expect = 5e-71
 Identities = 140/226 (61%), Positives = 169/226 (74%), Gaps = 7/226 (3%)
 Frame = +3

Query: 3   LAVNYMDRFLAFRGLPQANGSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFAP 182
           L+VNY+DRFL  R LPQ NG WPLQLLSVACLSLA KMEE LVPSLLDLQVEG K++F P
Sbjct: 103 LSVNYLDRFLNSRQLPQTNG-WPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEP 161

Query: 183 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 362
           +TI RMELLVLG LDWRLRS+TPF+F+DFFA K+DS+GT  GFL+SRAT+II+  I+E S
Sbjct: 162 KTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEAS 221

Query: 363 FLDYSPSSIAVASLLHAANEFSNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 542
           FL Y PS IA AS+LHAANE  N SF+ P +A +WC GL K++++ CYQLMQE+V+   +
Sbjct: 222 FLAYWPSCIAAASILHAANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNR 281

Query: 543 RKPPKVLPQLRV-------MTYAEYXXXXXXXXXXXXXNKRRRLNN 659
           RKPPKVLPQLRV        + + +              KRR+LNN
Sbjct: 282 RKPPKVLPQLRVTSRPIMRSSVSSFSASSSFSPSSSLSCKRRKLNN 327


>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  271 bits (692), Expect = 1e-70
 Identities = 140/219 (63%), Positives = 165/219 (75%)
 Frame = +3

Query: 3   LAVNYMDRFLAFRGLPQANGSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFAP 182
           L+VNY+DRFL  R LPQ NG WPLQLLSVACLSLA KMEE LVPSLLDLQVEG KFIF  
Sbjct: 95  LSVNYLDRFLYSRRLPQTNG-WPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFES 153

Query: 183 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 362
           +TI RMELLVLG LDWRLRSITPF+F+ FFAYK+DS+G+ IGFL+SRAT+II+  I+E S
Sbjct: 154 KTIRRMELLVLGVLDWRLRSITPFSFIGFFAYKLDSSGSVIGFLISRATQIILSNIQEAS 213

Query: 363 FLDYSPSSIAVASLLHAANEFSNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 542
           FL+Y PS IA A++L AANE   LS + P  A +WC GL K++I++CYQLMQE+ V   +
Sbjct: 214 FLEYWPSCIAAAAILCAANEIPKLSLVDPERAESWCDGLSKEKIISCYQLMQEITVDNNR 273

Query: 543 RKPPKVLPQLRVMTYAEYXXXXXXXXXXXXXNKRRRLNN 659
           RKPPK+LPQLRV   A                KRR+LNN
Sbjct: 274 RKPPKLLPQLRVTIRARVRSSGSSSSSSSSSYKRRKLNN 312


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  269 bits (687), Expect = 4e-70
 Identities = 132/192 (68%), Positives = 156/192 (81%)
 Frame = +3

Query: 3   LAVNYMDRFLAFRGLPQANGSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFAP 182
           L+VNY+DRFL  R LP     WPLQLLSVACLSLA KMEE+LVPSLLDLQVEG K++F P
Sbjct: 101 LSVNYLDRFLNSRPLPPKTNGWPLQLLSVACLSLAAKMEESLVPSLLDLQVEGAKYVFEP 160

Query: 183 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 362
           +TI RMELLVLG LDWRLRS+TPF+F+DFFA K+DSTGT  GFL+SRAT+II+  I+E S
Sbjct: 161 KTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEAS 220

Query: 363 FLDYSPSSIAVASLLHAANEFSNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 542
           FL Y PS IA A++LHAANE  N S + P +A +WC GL K++I+ CYQLMQE+V+   Q
Sbjct: 221 FLAYWPSCIAAAAILHAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQ 280

Query: 543 RKPPKVLPQLRV 578
           RKPPKVLPQLRV
Sbjct: 281 RKPPKVLPQLRV 292


>ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|355514665|gb|AES96288.1|
           Cyclin-D1-1 [Medicago truncatula]
          Length = 334

 Score =  260 bits (664), Expect = 2e-67
 Identities = 132/192 (68%), Positives = 154/192 (80%)
 Frame = +3

Query: 3   LAVNYMDRFLAFRGLPQANGSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFAP 182
           LAVNYMDRFL  R LPQ NG WPLQLLSVACLSLA KMEETLVPSLLDLQVEG K++F P
Sbjct: 100 LAVNYMDRFLNSRRLPQTNG-WPLQLLSVACLSLAAKMEETLVPSLLDLQVEGVKYMFEP 158

Query: 183 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 362
            TI RMELLVL  LDWRLRS+TPF+F+ FFA K+DST T  GFL+SRAT+II+  I+E S
Sbjct: 159 ITIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQEAS 218

Query: 363 FLDYSPSSIAVASLLHAANEFSNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 542
            L Y PS IA A++L+AANE  N S + P +A +WC GL K++I+ CYQLMQE+V+   Q
Sbjct: 219 ILAYWPSCIAAAAILYAANEIPNWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQ 278

Query: 543 RKPPKVLPQLRV 578
           RKPPKVLPQ+RV
Sbjct: 279 RKPPKVLPQMRV 290


>ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 348

 Score =  259 bits (663), Expect = 2e-67
 Identities = 136/195 (69%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
 Frame = +3

Query: 3   LAVNYMDRFLAFRGLPQANGSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFAP 182
           LAVNYMDRFL  R LP+ NG WPLQL+SVACLSLA KMEE LVPSLLDLQ+EG K+IF P
Sbjct: 113 LAVNYMDRFLDSRRLPETNG-WPLQLVSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEP 171

Query: 183 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 362
           RTI RMELLVLG LDWRLRS+TP  F+ FFA KVDSTGT I FL+SRATEIIV  I+E S
Sbjct: 172 RTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFIRFLISRATEIIVSNIQEAS 231

Query: 363 FLDYSPSSIAVASLLHAANEFSNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 542
           FL Y PS IA A++L AANE  N S + P NA +WC GL K++++ CYQLMQE+V+   Q
Sbjct: 232 FLAYWPSCIAAAAILTAANEIPNWSVVKPENAESWCEGLRKEKVIGCYQLMQELVINNNQ 291

Query: 543 RK-PPKVLPQLRVMT 584
           RK P KVLPQLRV T
Sbjct: 292 RKLPTKVLPQLRVTT 306