BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031607
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculi...   149   3e-34
gb|ADD29938.1| ribosomal protein S3 [Berberidopsis corallina]         143   1e-32
gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides]        143   2e-32
ref|YP_001294223.1| ribosomal protein S3 [Buxus microphylla] gi|...   142   2e-32
gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Mo...   141   6e-32

>ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculifolia]
           gi|226933921|gb|ACO92054.1| ribosomal protein S3
           [Megaleranthis saniculifolia]
          Length = 218

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/76 (94%), Positives = 75/76 (98%)
 Frame = +1

Query: 1   HHSVWFAQPKSYSEGLQEDQKIQDCIKNYVQKNMKISSSVEGIARIKIKKRIDLIQVIIY 180
           HHSVWF+QPKSYSEGLQEDQKIQ+CIKNYVQKNMKISS VEGIARIKI+KRIDLIQVIIY
Sbjct: 18  HHSVWFSQPKSYSEGLQEDQKIQNCIKNYVQKNMKISSGVEGIARIKIQKRIDLIQVIIY 77

Query: 181 MGFPKLLIEGSPRGIE 228
           MGFPKLLIEGSPRGIE
Sbjct: 78  MGFPKLLIEGSPRGIE 93


>gb|ADD29938.1| ribosomal protein S3 [Berberidopsis corallina]
          Length = 218

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/76 (89%), Positives = 74/76 (97%)
 Frame = +1

Query: 1   HHSVWFAQPKSYSEGLQEDQKIQDCIKNYVQKNMKISSSVEGIARIKIKKRIDLIQVIIY 180
           HHS+WFAQPK+YSEGLQEDQKI+DCIKNYVQKNM+ISS VEGIARI+I+KRIDLIQVIIY
Sbjct: 18  HHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIY 77

Query: 181 MGFPKLLIEGSPRGIE 228
           MGFPKLLIEG PRGIE
Sbjct: 78  MGFPKLLIEGRPRGIE 93


>gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides]
          Length = 218

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/76 (89%), Positives = 74/76 (97%)
 Frame = +1

Query: 1   HHSVWFAQPKSYSEGLQEDQKIQDCIKNYVQKNMKISSSVEGIARIKIKKRIDLIQVIIY 180
           HHS+WFAQPKSYSEGLQED+KI+DCIKNYVQKNM+ISS VEGIARI+I+KRIDLIQVIIY
Sbjct: 18  HHSLWFAQPKSYSEGLQEDKKIRDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIY 77

Query: 181 MGFPKLLIEGSPRGIE 228
           MGFPKLLIEG PRGIE
Sbjct: 78  MGFPKLLIEGRPRGIE 93


>ref|YP_001294223.1| ribosomal protein S3 [Buxus microphylla]
           gi|172048683|sp|A6MM75.1|RR3_BUXMI RecName: Full=30S
           ribosomal protein S3, chloroplastic
           gi|146762323|gb|ABQ45287.1| ribosomal protein S3 [Buxus
           microphylla]
          Length = 218

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/76 (88%), Positives = 73/76 (96%)
 Frame = +1

Query: 1   HHSVWFAQPKSYSEGLQEDQKIQDCIKNYVQKNMKISSSVEGIARIKIKKRIDLIQVIIY 180
           HHS+WFAQPKSYSEGLQEDQKI+DCIKNYVQKNM+ISS  EGIARI+I+KRIDLIQVIIY
Sbjct: 18  HHSLWFAQPKSYSEGLQEDQKIRDCIKNYVQKNMRISSGAEGIARIEIQKRIDLIQVIIY 77

Query: 181 MGFPKLLIEGSPRGIE 228
           MGFPKLLIEG PRG+E
Sbjct: 78  MGFPKLLIEGRPRGVE 93


>gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Moore 333]
          Length = 218

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/76 (86%), Positives = 73/76 (96%)
 Frame = +1

Query: 1   HHSVWFAQPKSYSEGLQEDQKIQDCIKNYVQKNMKISSSVEGIARIKIKKRIDLIQVIIY 180
           HHSVWFAQPK YSEGL+EDQKI+DCIKNYVQKNM+ISS VEGIARI+I+KRIDLIQVIIY
Sbjct: 18  HHSVWFAQPKKYSEGLEEDQKIRDCIKNYVQKNMRISSGVEGIARIEIQKRIDLIQVIIY 77

Query: 181 MGFPKLLIEGSPRGIE 228
           +GFPKLLIEG PRG+E
Sbjct: 78  IGFPKLLIEGRPRGVE 93