BLASTX nr result

ID: Coptis23_contig00031592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031592
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-a...   172   3e-41
ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...   171   6e-41
ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   171   7e-41
ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-a...   171   7e-41
ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arab...   171   7e-41

>ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Glycine max]
          Length = 1009

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/105 (75%), Positives = 93/105 (88%)
 Frame = -2

Query: 315 GGNLIVCPMTLLGQWKVEIKTHGEPGSFSVYVHYGHSRPKDVKLLAQNDVVLTTYGVLTL 136
           GGNLI+CPMTLLGQWK EI+TH  PGS S+YVHYG SRPKD K LA+NDVV+TTYG+L  
Sbjct: 470 GGNLIICPMTLLGQWKAEIETHAHPGSLSLYVHYGQSRPKDAKSLAENDVVITTYGILAS 529

Query: 135 EYSAENAEEGGGLYSMRWFRVVLDEAHTIKNSKSQISVATSALIA 1
           E+S+ENAE+ GGL+S+RWFRVVLDEAHTIK+SKSQIS A +ALI+
Sbjct: 530 EFSSENAEDNGGLFSIRWFRVVLDEAHTIKSSKSQISFAAAALIS 574


>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1028

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/107 (72%), Positives = 96/107 (89%)
 Frame = -2

Query: 321 LHGGNLIVCPMTLLGQWKVEIKTHGEPGSFSVYVHYGHSRPKDVKLLAQNDVVLTTYGVL 142
           ++GGNL++CPMTLLGQWK EI+TH +PGS SVYVHYG SR +D KLL+Q DVV+TTYGVL
Sbjct: 487 VNGGNLLICPMTLLGQWKAEIETHTQPGSLSVYVHYGQSRARDAKLLSQYDVVITTYGVL 546

Query: 141 TLEYSAENAEEGGGLYSMRWFRVVLDEAHTIKNSKSQISVATSALIA 1
             E+SAENAE+ GGLY+++WFRVVLDEAHTIK+SKSQIS+A +AL+A
Sbjct: 547 ASEFSAENAEDNGGLYTVQWFRVVLDEAHTIKSSKSQISIAAAALVA 593


>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/105 (76%), Positives = 92/105 (87%)
 Frame = -2

Query: 315 GGNLIVCPMTLLGQWKVEIKTHGEPGSFSVYVHYGHSRPKDVKLLAQNDVVLTTYGVLTL 136
           GGNLI+CPMTLLGQWK EI+TH +PGS SVYVHYG  R KD K+LAQNDVV+TTYGVL  
Sbjct: 490 GGNLIICPMTLLGQWKAEIETHAQPGSLSVYVHYGQGRLKDAKILAQNDVVITTYGVLAS 549

Query: 135 EYSAENAEEGGGLYSMRWFRVVLDEAHTIKNSKSQISVATSALIA 1
           E+S E+AE+ GGLYS+ WFRVVLDEAHTIK+SKSQIS+A +ALIA
Sbjct: 550 EFSPEHAEDNGGLYSVHWFRVVLDEAHTIKSSKSQISMAAAALIA 594


>ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Glycine max]
          Length = 1008

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/107 (73%), Positives = 95/107 (88%)
 Frame = -2

Query: 321 LHGGNLIVCPMTLLGQWKVEIKTHGEPGSFSVYVHYGHSRPKDVKLLAQNDVVLTTYGVL 142
           + GGNLI+CPMTLLGQWK EI+TH  PGS S+YVHYG SRPKD K LAQ+DVV+TTYG+L
Sbjct: 467 MSGGNLIICPMTLLGQWKAEIETHVHPGSLSLYVHYGQSRPKDAKSLAQSDVVITTYGIL 526

Query: 141 TLEYSAENAEEGGGLYSMRWFRVVLDEAHTIKNSKSQISVATSALIA 1
             E+S+E+AE+ GGL+S+RWFRVVLDEAHTIK+SKSQIS+A +ALIA
Sbjct: 527 ASEFSSESAEDNGGLFSIRWFRVVLDEAHTIKSSKSQISLAAAALIA 573


>ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
           lyrata] gi|297319921|gb|EFH50343.1| hypothetical protein
           ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata]
          Length = 1029

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/106 (74%), Positives = 94/106 (88%)
 Frame = -2

Query: 318 HGGNLIVCPMTLLGQWKVEIKTHGEPGSFSVYVHYGHSRPKDVKLLAQNDVVLTTYGVLT 139
           +GGNLIVCPMTLLGQWK EI+ H +PGS SVYVHYG SRPKD KLL+QNDVV+TTYGVLT
Sbjct: 489 NGGNLIVCPMTLLGQWKSEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQNDVVITTYGVLT 548

Query: 138 LEYSAENAEEGGGLYSMRWFRVVLDEAHTIKNSKSQISVATSALIA 1
            E+S EN+ +  G+Y++RWFR+VLDEAHTIKNSKSQIS+A +AL+A
Sbjct: 549 SEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVA 594


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