BLASTX nr result

ID: Coptis23_contig00031575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031575
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   241   3e-62
ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D...   234   7e-60
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...   232   3e-59
gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]    230   1e-58
ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58

>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  241 bits (616), Expect = 3e-62
 Identities = 111/134 (82%), Positives = 127/134 (94%)
 Frame = +3

Query: 6   KSEADDQAFPLPSMAEFRPDKRLSLVKSFKSPHNPPDFDHTRWLFETKGTYGYGNAVWPR 185
           +SEA+DQA PLPSMA+F+PDKRLSLVKSFK+P++  DFDHTRWL+ETKGTYGYGNAVWP+
Sbjct: 215 RSEAEDQALPLPSMADFKPDKRLSLVKSFKAPNH--DFDHTRWLYETKGTYGYGNAVWPK 272

Query: 186 DEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLVALGFFLTWRIR 365
           D +G GSGVNGFE+PPDFGE+ RRPLTRKV VSAAI+SPYRLL+++RLVALGFFLTWRIR
Sbjct: 273 DGYGFGSGVNGFEHPPDFGEKTRRPLTRKVNVSAAIISPYRLLVLLRLVALGFFLTWRIR 332

Query: 366 HPNRDAMWLWGMSI 407
           HPNRDAMWLWGMSI
Sbjct: 333 HPNRDAMWLWGMSI 346


>ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D5-like [Cucumis
           sativus] gi|449531183|ref|XP_004172567.1| PREDICTED:
           cellulose synthase-like protein D5-like [Cucumis
           sativus]
          Length = 1169

 Score =  234 bits (596), Expect = 7e-60
 Identities = 105/132 (79%), Positives = 121/132 (91%)
 Frame = +3

Query: 12  EADDQAFPLPSMAEFRPDKRLSLVKSFKSPHNPPDFDHTRWLFETKGTYGYGNAVWPRDE 191
           EA+DQA PLPSMA+ + DKRLSLVKSFK+ ++PPDFDH RWLFETKGTYGYGNAVWP+D 
Sbjct: 210 EAEDQALPLPSMADAKLDKRLSLVKSFKAQNHPPDFDHARWLFETKGTYGYGNAVWPKDG 269

Query: 192 FGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLVALGFFLTWRIRHP 371
           +G GSG NGF++PPDFGE+ RRPLTRKV VSAAILSPYRLL++IRLVALGFFLTWR+RHP
Sbjct: 270 YGFGSGANGFDHPPDFGEKSRRPLTRKVSVSAAILSPYRLLIIIRLVALGFFLTWRVRHP 329

Query: 372 NRDAMWLWGMSI 407
           N +A+WLWGMSI
Sbjct: 330 NHEALWLWGMSI 341


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score =  232 bits (591), Expect = 3e-59
 Identities = 109/133 (81%), Positives = 119/133 (89%)
 Frame = +3

Query: 9   SEADDQAFPLPSMAEFRPDKRLSLVKSFKSPHNPPDFDHTRWLFETKGTYGYGNAVWPRD 188
           SE DDQA PLPSM E + DKRLSLVKSFK P++PPDFDHTRWLFETKGTYGYGNA+WP+D
Sbjct: 217 SEEDDQALPLPSMRESKLDKRLSLVKSFKGPNHPPDFDHTRWLFETKGTYGYGNALWPKD 276

Query: 189 EFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLVALGFFLTWRIRH 368
             G GSG +GFE PPDFGER +RPLTRKV VS AILSPYRLL+++RLVALGFFLTWRIRH
Sbjct: 277 --GYGSGASGFENPPDFGERSKRPLTRKVGVSPAILSPYRLLIILRLVALGFFLTWRIRH 334

Query: 369 PNRDAMWLWGMSI 407
           PNRDAMWLWGMSI
Sbjct: 335 PNRDAMWLWGMSI 347


>gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 1166

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/134 (81%), Positives = 118/134 (88%)
 Frame = +3

Query: 6   KSEADDQAFPLPSMAEFRPDKRLSLVKSFKSPHNPPDFDHTRWLFETKGTYGYGNAVWPR 185
           KSEADDQA PLP +     DKRLSLVKSFK+  +PPDFDHTRWLFETKGTYGYGNAVWP+
Sbjct: 212 KSEADDQALPLPKL-----DKRLSLVKSFKAQSHPPDFDHTRWLFETKGTYGYGNAVWPK 266

Query: 186 DEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLVALGFFLTWRIR 365
           D +G+GSG NGFE PPDFGER RRPLTRKV VSAAILSPYRLL++IRL ALG FLTWRIR
Sbjct: 267 DGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSAAILSPYRLLIMIRLAALGLFLTWRIR 326

Query: 366 HPNRDAMWLWGMSI 407
           HPNR+AMWLWGMSI
Sbjct: 327 HPNREAMWLWGMSI 340


>ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|222861762|gb|EEE99304.1|
           predicted protein [Populus trichocarpa]
          Length = 1138

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/134 (81%), Positives = 118/134 (88%)
 Frame = +3

Query: 6   KSEADDQAFPLPSMAEFRPDKRLSLVKSFKSPHNPPDFDHTRWLFETKGTYGYGNAVWPR 185
           KSEADDQA PLP +     DKRLSLVKSFK+  +PPDFDHTRWLFETKGTYGYGNAVWP+
Sbjct: 184 KSEADDQALPLPKL-----DKRLSLVKSFKAQSHPPDFDHTRWLFETKGTYGYGNAVWPK 238

Query: 186 DEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLVALGFFLTWRIR 365
           D +G+GSG NGFE PPDFGER RRPLTRKV VSAAILSPYRLL++IRL ALG FLTWRIR
Sbjct: 239 DGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSAAILSPYRLLIMIRLAALGLFLTWRIR 298

Query: 366 HPNRDAMWLWGMSI 407
           HPNR+AMWLWGMSI
Sbjct: 299 HPNREAMWLWGMSI 312


Top