BLASTX nr result

ID: Coptis23_contig00031567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031567
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-l...   185   4e-45
emb|CBI27588.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_002514946.1| conserved hypothetical protein [Ricinus comm...   185   4e-45
emb|CBI27589.3| unnamed protein product [Vitis vinifera]              182   2e-44

>ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|222852452|gb|EEE89999.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/138 (65%), Positives = 110/138 (79%)
 Frame = +1

Query: 1   LNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIHMSYCTPSGFKLLASNYLQ 180
           LNF+DGLWSSCGDERII+FTTN+KD+LDPALLRPGRMDMHIHMSYCTP GFK+LASNYL 
Sbjct: 325 LNFVDGLWSSCGDERIIVFTTNYKDKLDPALLRPGRMDMHIHMSYCTPCGFKILASNYLN 384

Query: 181 IKNDPLFEEIELLINDVNVTPAEVAEELMKSDDTKASLKGLINFLERKKAECDKSNDNNV 360
           +KN  LF +IE LI +V VTPAEVAEELMK++D   +L G+I FLERKK    K   + V
Sbjct: 385 VKNHSLFSQIEELIMEVEVTPAEVAEELMKNEDVDTALTGIIGFLERKKGM--KRKQSGV 442

Query: 361 EDRGRPESLKAESEHENE 414
           E++   +  + E++ +NE
Sbjct: 443 EEQKVGDENQEENDKKNE 460


>ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-like [Vitis vinifera]
          Length = 543

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/143 (65%), Positives = 109/143 (76%), Gaps = 2/143 (1%)
 Frame = +1

Query: 1   LNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIHMSYCTPSGFKLLASNYLQ 180
           LNFIDGLWSSCGDERII+FTTNHKDR+DPALLRPGRMDMHIHMSYCTP GFK LASNYL 
Sbjct: 389 LNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIHMSYCTPYGFKTLASNYLG 448

Query: 181 IKNDPLFEEIELLINDVNVTPAEVAEELMKSDDTKASLKGLINFLERKKAECDKSN--DN 354
           + N  LF EIE LI +V VTPAE+AEELMKS++   +L+GLI FL+R K   +KSN    
Sbjct: 449 VSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLIEFLKRAKIAENKSNGEGK 508

Query: 355 NVEDRGRPESLKAESEHENEVEK 423
            V+++G       ESE   E ++
Sbjct: 509 EVDEQGTERRDVVESEKVVETKR 531


>emb|CBI27588.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/143 (65%), Positives = 109/143 (76%), Gaps = 2/143 (1%)
 Frame = +1

Query: 1   LNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIHMSYCTPSGFKLLASNYLQ 180
           LNFIDGLWSSCGDERII+FTTNHKDR+DPALLRPGRMDMHIHMSYCTP GFK LASNYL 
Sbjct: 317 LNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIHMSYCTPYGFKTLASNYLG 376

Query: 181 IKNDPLFEEIELLINDVNVTPAEVAEELMKSDDTKASLKGLINFLERKKAECDKSN--DN 354
           + N  LF EIE LI +V VTPAE+AEELMKS++   +L+GLI FL+R K   +KSN    
Sbjct: 377 VSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLIEFLKRAKIAENKSNGEGK 436

Query: 355 NVEDRGRPESLKAESEHENEVEK 423
            V+++G       ESE   E ++
Sbjct: 437 EVDEQGTERRDVVESEKVVETKR 459


>ref|XP_002514946.1| conserved hypothetical protein [Ricinus communis]
           gi|223545997|gb|EEF47500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score =  185 bits (469), Expect = 4e-45
 Identities = 91/139 (65%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   LNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIHMSYCTPSGFKLLASNYLQ 180
           LNFIDGLWSSCG+ERII+FT N+KD+LDPALLRPGRMDMHIHMSYC+PSGFK+LASNYL 
Sbjct: 68  LNFIDGLWSSCGNERIIVFTINYKDKLDPALLRPGRMDMHIHMSYCSPSGFKILASNYLN 127

Query: 181 IKNDPLFEEIELLINDVNVTPAEVAEELMKSDDTKASLKGLINFLERKKA-ECDKSNDNN 357
           IKN  LF EIE LI +V VTPAE+AEELMK DD  A L GL  FL+RKK  +C+K+    
Sbjct: 128 IKNHCLFTEIEKLIEEVEVTPAEIAEELMKGDDVDAVLNGLQGFLQRKKVMKCEKTEAET 187

Query: 358 VEDRGRPESLKAESEHENE 414
             +    E ++ E+E E +
Sbjct: 188 QAEMDYKEVIRNENEKEGQ 206


>emb|CBI27589.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/126 (70%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   LNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIHMSYCTPSGFKLLASNYLQ 180
           LNFIDGLWSSCGDERII+FTTNHKDR+DPALLRPGRMDMHIHMSYCTP GFK LASNYL 
Sbjct: 317 LNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIHMSYCTPYGFKTLASNYLG 376

Query: 181 IKNDPLFEEIELLINDVNVTPAEVAEELMKSDDTKASLKGLINFLERKKAECDKSN--DN 354
           + N  LF EIE LI +V VTPAE+AEELMKS++   +L+GLI FL+R K+  +KSN    
Sbjct: 377 VSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLIAFLKRAKSAENKSNCRGK 436

Query: 355 NVEDRG 372
            V+++G
Sbjct: 437 KVDEQG 442


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