BLASTX nr result

ID: Coptis23_contig00031523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031523
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]        186   2e-45
ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis...   186   2e-45
ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrat...   183   1e-44
ref|XP_002525637.1| ATP-binding cassette transporter, putative [...   183   1e-44

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  190 bits (482), Expect = 1e-46
 Identities = 95/134 (70%), Positives = 107/134 (79%)
 Frame = +3

Query: 3   NFVHLMEGTVLMALLQPAPETXXXXXXXXXXXXXXXVYQGPREQVVEFFESLGFRLPPRK 182
           NFVHLME TVLMALLQPAPET               VYQGPR +V+EFFESLGF+LPPRK
Sbjct: 375 NFVHLMEATVLMALLQPAPETFDLFDDLVLLSEGYVVYQGPRAEVLEFFESLGFKLPPRK 434

Query: 183 GVADFLQEVTSRKDQAQYWADPSKPYVFIPVPEIKSAFRHSKYGRSVESTLSVPFDKAKS 362
           GVADFLQEVTS+KDQAQYWAD SKPY+F+P  EI  AF++SKYG+ V+S LSVPFDK+KS
Sbjct: 435 GVADFLQEVTSKKDQAQYWADQSKPYLFLPTSEIAKAFKNSKYGKYVDSELSVPFDKSKS 494

Query: 363 LPSALFKTKYAVSK 404
             SAL KTKYAVS+
Sbjct: 495 HVSALSKTKYAVSR 508


>gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]
          Length = 1443

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/133 (68%), Positives = 104/133 (78%)
 Frame = +3

Query: 3   NFVHLMEGTVLMALLQPAPETXXXXXXXXXXXXXXXVYQGPREQVVEFFESLGFRLPPRK 182
           NFVHLM+ TVLMALLQPAPET               VYQGPRE V+ FFESLGFRLPPRK
Sbjct: 394 NFVHLMDATVLMALLQPAPETFDLFDDLILLSEGYMVYQGPREDVIAFFESLGFRLPPRK 453

Query: 183 GVADFLQEVTSRKDQAQYWADPSKPYVFIPVPEIKSAFRHSKYGRSVESTLSVPFDKAKS 362
           GVADFLQEVTS+KDQAQYWADPSKPY FIPV +I +AFR+SKYG + +S L+ PFDK  +
Sbjct: 454 GVADFLQEVTSKKDQAQYWADPSKPYQFIPVSDIAAAFRNSKYGHAADSKLAAPFDKKSA 513

Query: 363 LPSALFKTKYAVS 401
            PSAL +TK+A+S
Sbjct: 514 DPSALCRTKFAIS 526


>ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis thaliana]
           gi|75326886|sp|Q7PC88.1|AB31G_ARATH RecName: Full=ABC
           transporter G family member 31; Short=ABC transporter
           ABCG.31; Short=AtABCG31; AltName: Full=Probable
           pleiotropic drug resistance protein 3
           gi|28144325|tpg|DAA00871.1| TPA_exp: PDR3 ABC
           transporter [Arabidopsis thaliana]
           gi|330253231|gb|AEC08325.1| ABC transporter G family
           member 31 [Arabidopsis thaliana]
          Length = 1426

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/133 (68%), Positives = 104/133 (78%)
 Frame = +3

Query: 3   NFVHLMEGTVLMALLQPAPETXXXXXXXXXXXXXXXVYQGPREQVVEFFESLGFRLPPRK 182
           NFVHLM+ TVLMALLQPAPET               VYQGPRE V+ FFESLGFRLPPRK
Sbjct: 377 NFVHLMDATVLMALLQPAPETFDLFDDLILLSEGYMVYQGPREDVIAFFESLGFRLPPRK 436

Query: 183 GVADFLQEVTSRKDQAQYWADPSKPYVFIPVPEIKSAFRHSKYGRSVESTLSVPFDKAKS 362
           GVADFLQEVTS+KDQAQYWADPSKPY FIPV +I +AFR+SKYG + +S L+ PFDK  +
Sbjct: 437 GVADFLQEVTSKKDQAQYWADPSKPYQFIPVSDIAAAFRNSKYGHAADSKLAAPFDKKSA 496

Query: 363 LPSALFKTKYAVS 401
            PSAL +TK+A+S
Sbjct: 497 DPSALCRTKFAIS 509


>ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325079|gb|EFH55499.1| ATPDR3/PDR3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1428

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/133 (66%), Positives = 103/133 (77%)
 Frame = +3

Query: 3   NFVHLMEGTVLMALLQPAPETXXXXXXXXXXXXXXXVYQGPREQVVEFFESLGFRLPPRK 182
           NFVHLM+ TVLMALLQPAPET               VYQGPRE V+ FFESLGFR+PPRK
Sbjct: 377 NFVHLMDATVLMALLQPAPETFDLFDDLILLSEGYMVYQGPREDVIAFFESLGFRIPPRK 436

Query: 183 GVADFLQEVTSRKDQAQYWADPSKPYVFIPVPEIKSAFRHSKYGRSVESTLSVPFDKAKS 362
           GVADFLQEVTS+KDQAQYW DPSKPY FIPV +I +AFR+SKYG + +S L+ PFDK+  
Sbjct: 437 GVADFLQEVTSKKDQAQYWVDPSKPYQFIPVSDIAAAFRNSKYGHAADSKLATPFDKSSV 496

Query: 363 LPSALFKTKYAVS 401
            PSAL +TK+A+S
Sbjct: 497 DPSALCRTKFAIS 509


>ref|XP_002525637.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535073|gb|EEF36755.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1433

 Score =  183 bits (465), Expect = 1e-44
 Identities = 91/134 (67%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   NFVHLMEGTVLMALLQPAPETXXXXXXXXXXXXXXXVYQGPREQVVEFFESLGFRLPPRK 182
           NFVH M+GTVLMALLQP PET               VYQGPR +V+EFFESLGFRLPPRK
Sbjct: 374 NFVHQMDGTVLMALLQPPPETFDLFDDLVLLSEGYMVYQGPRAEVLEFFESLGFRLPPRK 433

Query: 183 GVADFLQEVTSRKDQAQYWADPSKPYVFIPVPEIKSAFRHSKYGRSVESTLSVPFDKAKS 362
           GVADFLQEVTS+KDQAQYW D  KPY +IPVPEI  AF+ S++GRSVES +SVPFDK K 
Sbjct: 434 GVADFLQEVTSKKDQAQYWDDHLKPYAYIPVPEIAKAFKSSRWGRSVESMVSVPFDKTKD 493

Query: 363 LPSALFKTKYAVSK 404
            PSAL KT++AV +
Sbjct: 494 SPSALAKTEFAVPR 507


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