BLASTX nr result

ID: Coptis23_contig00031508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031508
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium di...    54   1e-05

>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -2

Query: 101 KYKLVSDKLYLTISYLDRYLSLNVLNRHKLQLL 3
           +YK+VSD LYLT+SY+DR+LS NVLNR +LQLL
Sbjct: 144 EYKIVSDTLYLTVSYIDRFLSFNVLNRQRLQLL 176


>ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium distachyon]
          Length = 368

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 101 KYKLVSDKLYLTISYLDRYLSLNVLNRHKLQLL 3
           +YKLVSD LYLTISY+DR+LS N LNR KLQLL
Sbjct: 147 EYKLVSDTLYLTISYIDRFLSANSLNRQKLQLL 179


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