BLASTX nr result

ID: Coptis23_contig00031355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031355
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80...   148   5e-34
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   148   5e-34

>ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|222860156|gb|EEE97703.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = +3

Query: 3   RAVRFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFA 182
           R VRFENVR++N+ NPIIIDQFYCDSPKSC+NQTSAV IS+I+YRNISGTTKSA+AMKF+
Sbjct: 298 RGVRFENVRMDNVDNPIIIDQFYCDSPKSCQNQTSAVRISEIMYRNISGTTKSAKAMKFS 357

Query: 183 CSDTVPCNKIVLGNINLEKDDGTVE 257
           CSDT PC+ IVL N+NLEK+DGTVE
Sbjct: 358 CSDTAPCSTIVLSNVNLEKEDGTVE 382


>ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 462

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = +3

Query: 3   RAVRFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFA 182
           RAVR++NVR+E++ANPI+IDQFYCDSP  CKNQTSAV+ISQI+YRNISGTTKSA+AMKFA
Sbjct: 327 RAVRYQNVRMEDVANPILIDQFYCDSPNECKNQTSAVQISQIMYRNISGTTKSAKAMKFA 386

Query: 183 CSDTVPCNKIVLGNINLEKDDGTVE 257
           CSD+ PCN IV+ NINLEK DGTVE
Sbjct: 387 CSDSFPCNNIVVSNINLEKKDGTVE 411


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = +3

Query: 3    RAVRFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFA 182
            RAVR++NVR+E++ANPI+IDQFYCDSP  CKNQTSAV+ISQI+YRNISGTTKSA+AMKFA
Sbjct: 976  RAVRYQNVRMEDVANPILIDQFYCDSPNECKNQTSAVQISQIMYRNISGTTKSAKAMKFA 1035

Query: 183  CSDTVPCNKIVLGNINLEKDDGTVE 257
            CSD+ PCN IV+ NINLEK DGTVE
Sbjct: 1036 CSDSFPCNNIVVSNINLEKKDGTVE 1060


>ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|222838569|gb|EEE76934.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/85 (81%), Positives = 78/85 (91%)
 Frame = +3

Query: 3   RAVRFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFA 182
           R VRFENV +EN+ANP+IIDQFYCDSPK+C NQTSAVEIS+I YRNISGTTKS++AMKFA
Sbjct: 328 RGVRFENVGMENVANPVIIDQFYCDSPKTCHNQTSAVEISEITYRNISGTTKSSKAMKFA 387

Query: 183 CSDTVPCNKIVLGNINLEKDDGTVE 257
           CSDTVPC+ IVL NINLEK+DGT E
Sbjct: 388 CSDTVPCSNIVLSNINLEKNDGTEE 412


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = +3

Query: 3    RAVRFENVRVENIANPIIIDQFYCDSPKSCKNQTSAVEISQIVYRNISGTTKSARAMKFA 182
            RAVR++NVR+E++ANPI+IDQFYCDSP  CKNQTSAV+ISQI+YRNISGTTKSA+AMKFA
Sbjct: 917  RAVRYQNVRMEDVANPILIDQFYCDSPNECKNQTSAVQISQIMYRNISGTTKSAKAMKFA 976

Query: 183  CSDTVPCNKIVLGNINLEKDDGTVE 257
            CSD+ PCN IV+ NINLEK DGTVE
Sbjct: 977  CSDSFPCNNIVVSNINLEKKDGTVE 1001


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