BLASTX nr result

ID: Coptis23_contig00031308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031308
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002335785.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/82 (35%), Positives = 45/82 (54%)
 Frame = +1

Query: 1   QNLIEWNRDKIGNVKTRVQETKIEIDEIQVKMQEDPMNAELMTAERRIANEYVKAAKSEE 180
           Q L  +N     N+  RV++ K E+D+ Q  +     N  L   ER + ++Y    ++EE
Sbjct: 257 QELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEE 316

Query: 181 GFYK*KSRDQVICLGD*NTTYF 246
            F+K K+R Q + LGD NT+YF
Sbjct: 317 SFFKQKARIQWLSLGDQNTSYF 338


>ref|XP_002335785.1| predicted protein [Populus trichocarpa] gi|222834756|gb|EEE73219.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = +1

Query: 7   LIEWNRDKIGNVKTRVQETKIEIDEIQVKMQEDPMNAELMTAERRIANEYVKAAKSEEGF 186
           L E+N    G +  R+ E K ++ E Q ++Q+ P + E+   E  I  +YV+ A+ EE F
Sbjct: 57  LKEFNFKYFGKISERMLEAKRKMGEAQCQLQKTPSDVEIHRIEPIIVKDYVRLAEVEESF 116

Query: 187 YK*KSRDQVICLGD*NTTYFF 249
            + KSR Q + LGD N+ +FF
Sbjct: 117 LRKKSRLQWLNLGDKNSKFFF 137


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