BLASTX nr result

ID: Coptis23_contig00031037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031037
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538793.1| PREDICTED: histidine triad nucleotide-bindin...    58   7e-07
gb|ACU19512.1| unknown [Glycine max]                                   58   7e-07
ref|XP_002266460.2| PREDICTED: histidine triad nucleotide-bindin...    57   1e-06
ref|XP_002304274.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002334636.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_003538793.1| PREDICTED: histidine triad nucleotide-binding protein 3-like
           [Glycine max]
          Length = 149

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = -1

Query: 261 PFSPRWKHLKYMSMGPLGFIEAEKLLEKIKP 169
           P++PRW+ +KY+S+GPLGFIEAEK LEKIKP
Sbjct: 112 PYTPRWRSIKYLSLGPLGFIEAEKFLEKIKP 142


>gb|ACU19512.1| unknown [Glycine max]
          Length = 153

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = -1

Query: 261 PFSPRWKHLKYMSMGPLGFIEAEKLLEKIKP 169
           P++PRW+ +KY+S+GPLGFIEAEK LEKIKP
Sbjct: 116 PYTPRWRSIKYLSLGPLGFIEAEKFLEKIKP 146


>ref|XP_002266460.2| PREDICTED: histidine triad nucleotide-binding protein 3-like [Vitis
           vinifera]
          Length = 146

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
 Frame = -1

Query: 261 PFSPRWKHLKYMSMGPL-GFIEAEKLLEKIKP 169
           PF+PRWK +KY+S+GPL GFIEAEKLLEKIKP
Sbjct: 111 PFTPRWKRVKYLSLGPLGGFIEAEKLLEKIKP 142


>ref|XP_002304274.1| predicted protein [Populus trichocarpa] gi|222841706|gb|EEE79253.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -1

Query: 261 PFSPRWKHLKYMSMGPLGFIEAEKLLEKIKP 169
           PF PRWKH+KYMS+G  GFIEAE+LLEKIKP
Sbjct: 111 PFIPRWKHVKYMSLGHHGFIEAEQLLEKIKP 141


>ref|XP_002334636.1| predicted protein [Populus trichocarpa] gi|222874164|gb|EEF11295.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = -1

Query: 261 PFSPRWKHLKYMSMGPLGFIEAEKLLEKIKP 169
           PF P+WKH+KYMS+G  GFIEAE+LLEKIKP
Sbjct: 23  PFIPKWKHVKYMSLGHHGFIEAEQLLEKIKP 53


Top