BLASTX nr result
ID: Coptis23_contig00030200
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030200 (613 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002867916.1| kelch repeat-containing F-box family protein... 57 3e-06 ref|XP_002867915.1| hypothetical protein ARALYDRAFT_329577 [Arab... 57 3e-06 >ref|XP_002867916.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297313752|gb|EFH44175.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 397 Score = 56.6 bits (135), Expect = 3e-06 Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Frame = +1 Query: 346 VDSKVYIIGGLDCDSQMPGYHHIPSSTVQVIDTPS--FGETASMSVGTAMYGGKSSALTA 519 V S++Y+IGG DS+ PSSTV+V+D S + + SM++ + +AL Sbjct: 147 VGSEIYVIGG-PVDSE-------PSSTVRVLDCCSHTWRDAPSMTIV------RMNALAC 192 Query: 520 VLDGKIYVFGSPAKLTGEPWAEVFDPATNRW 612 DGKIYV G L EPWAEVFD T W Sbjct: 193 FHDGKIYVMGGCQGLEDEPWAEVFDTKTKTW 223 >ref|XP_002867915.1| hypothetical protein ARALYDRAFT_329577 [Arabidopsis lyrata subsp. lyrata] gi|297313751|gb|EFH44174.1| hypothetical protein ARALYDRAFT_329577 [Arabidopsis lyrata subsp. lyrata] Length = 779 Score = 56.6 bits (135), Expect = 3e-06 Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Frame = +1 Query: 346 VDSKVYIIGGLDCDSQMPGYHHIPSSTVQVIDTPS--FGETASMSVGTAMYGGKSSALTA 519 V S++Y+IGG DS+ PSSTV+V+D S + + SM++ + +AL Sbjct: 529 VGSEIYVIGG-PVDSE-------PSSTVRVLDCCSHTWRDAPSMTIV------RMNALAC 574 Query: 520 VLDGKIYVFGSPAKLTGEPWAEVFDPATNRW 612 DGKIYV G L EPWAEVFD T W Sbjct: 575 FHDGKIYVMGGCQGLEDEPWAEVFDTKTKTW 605