BLASTX nr result

ID: Coptis23_contig00029780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029780
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527569.1| Gibberellin receptor GID1, putative [Ricinus...   130   1e-28
emb|CBI24401.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002277507.1| PREDICTED: probable carboxylesterase 15 [Vit...   123   1e-26
ref|XP_002313627.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
emb|CAN74724.1| hypothetical protein VITISV_037263 [Vitis vinifera]   122   3e-26

>ref|XP_002527569.1| Gibberellin receptor GID1, putative [Ricinus communis]
           gi|223533061|gb|EEF34821.1| Gibberellin receptor GID1,
           putative [Ricinus communis]
          Length = 328

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/86 (72%), Positives = 70/86 (81%)
 Frame = -1

Query: 259 MSNPSTPYEVDNCRGVLSVLSDGSITRSTKPSFNVPIDDDGSVLFKDALFDPTHDLYLRL 80
           MSN STPYEVD CRGVL V SDGSI RST+PSF VP+ D GSVL+KD LFDP H+L+LRL
Sbjct: 1   MSN-STPYEVDECRGVLRVYSDGSIWRSTEPSFKVPVHDGGSVLWKDCLFDPVHNLHLRL 59

Query: 79  YKPXXXXXXSKLPIFFYIHGGGFCIG 2
           YKP      +KLP+F+YIHGGGFCIG
Sbjct: 60  YKPASSSSSTKLPVFYYIHGGGFCIG 85


>emb|CBI24401.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = -1

Query: 247 STPYEVDNCRGVLSVLSDGSITRSTKPSFNVPIDDDGSVLFKDALFDPTHDLYLRLYKPX 68
           S+PYEV+ CRGVL V SDGSI RS++PSF VP+ DDGSVL+KD LFDP HDL LRLYKP 
Sbjct: 19  SSPYEVEECRGVLRVYSDGSIVRSSQPSFAVPVHDDGSVLWKDVLFDPQHDLQLRLYKP- 77

Query: 67  XXXXXSKLPIFFYIHGGGFCIG 2
                +KLPIF+YIHGGGFCIG
Sbjct: 78  -ASPSAKLPIFYYIHGGGFCIG 98


>ref|XP_002277507.1| PREDICTED: probable carboxylesterase 15 [Vitis vinifera]
          Length = 317

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = -1

Query: 247 STPYEVDNCRGVLSVLSDGSITRSTKPSFNVPIDDDGSVLFKDALFDPTHDLYLRLYKPX 68
           S+PYEV+ CRGVL V SDGSI RS++PSF VP+ DDGSVL+KD LFDP HDL LRLYKP 
Sbjct: 2   SSPYEVEECRGVLRVYSDGSIVRSSQPSFAVPVHDDGSVLWKDVLFDPQHDLQLRLYKP- 60

Query: 67  XXXXXSKLPIFFYIHGGGFCIG 2
                +KLPIF+YIHGGGFCIG
Sbjct: 61  -ASPSAKLPIFYYIHGGGFCIG 81


>ref|XP_002313627.1| predicted protein [Populus trichocarpa] gi|222850035|gb|EEE87582.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/93 (66%), Positives = 71/93 (76%), Gaps = 7/93 (7%)
 Frame = -1

Query: 259 MSNPST-------PYEVDNCRGVLSVLSDGSITRSTKPSFNVPIDDDGSVLFKDALFDPT 101
           MSN +T       PYEVD CRGVL V SDGSI RS++PSF VP+ DDGSV++KDA FD T
Sbjct: 1   MSNVTTGAAAAEQPYEVDECRGVLRVYSDGSIWRSSEPSFKVPVHDDGSVVWKDAFFDST 60

Query: 100 HDLYLRLYKPXXXXXXSKLPIFFYIHGGGFCIG 2
           HDL+LRLYKP      +KLPIF+YIHGGGFCIG
Sbjct: 61  HDLHLRLYKP-ASPSSTKLPIFYYIHGGGFCIG 92


>emb|CAN74724.1| hypothetical protein VITISV_037263 [Vitis vinifera]
          Length = 317

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = -1

Query: 247 STPYEVDNCRGVLSVLSDGSITRSTKPSFNVPIDDDGSVLFKDALFDPTHDLYLRLYKPX 68
           S+PY+V+ CRGVL V SDGSI RS++PSF VP+ DDGSVL+KD LFDP HDL LRLYKP 
Sbjct: 2   SSPYQVEECRGVLRVYSDGSIVRSSQPSFAVPVHDDGSVLWKDVLFDPQHDLQLRLYKP- 60

Query: 67  XXXXXSKLPIFFYIHGGGFCIG 2
                +KLPIF+YIHGGGFCIG
Sbjct: 61  -ASPSAKLPIFYYIHGGGFCIG 81


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