BLASTX nr result

ID: Coptis23_contig00029542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029542
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527487.1| conserved hypothetical protein [Ricinus comm...   206   5e-51
ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|2...   202   8e-50
ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_003555288.1| PREDICTED: uncharacterized protein LOC100814...   191   1e-46
ref|XP_002263699.1| PREDICTED: uncharacterized protein LOC100251...   189   6e-46

>ref|XP_002527487.1| conserved hypothetical protein [Ricinus communis]
            gi|223533127|gb|EEF34885.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 902

 Score =  206 bits (524), Expect = 5e-51
 Identities = 138/293 (47%), Positives = 179/293 (61%), Gaps = 60/293 (20%)
 Frame = +3

Query: 36   KLVDVMLERLKCLQEDELASLATIVATCGLNAALLEVENTKHH--GSESGINSTKSCSLL 209
            KLVD+ML+RL+CL+EDEL+SLATIVATCGLNAAL E E++K H  GS +   S+ +    
Sbjct: 328  KLVDMMLDRLRCLKEDELSSLATIVATCGLNAALAEEESSKLHDPGSAADYTSSSNIPRR 387

Query: 210  GGGTARRF------SMDHSKIGPARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKN 371
                 RR       SM +S +   RRKQV  ELPSLDKFLVKHM+KLE EVQEAK+ R+N
Sbjct: 388  MSNIPRRMPSAGAGSMRYSNLEQMRRKQVESELPSLDKFLVKHMTKLEREVQEAKNSRRN 447

Query: 372  HAQGGSVEE---------NL-------------------------EGSESRLDS------ 431
             +  G++E          NL                         E  E++ +S      
Sbjct: 448  GSAEGNIENADKIDQGTGNLANNTLHESIPNLGSILVKHSPKLEKELEEAKKNSRKIFEF 507

Query: 432  ----MSSNVTTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFEMKSKQL--------G 575
                 +S++T+SEA+P+LG++L+KH SKLEKE+   +K S +E +  SK+L         
Sbjct: 508  PCKKAASDLTSSEAIPNLGSILIKHSSKLEKEVLQIRKNSNKELKSDSKELERAPNRAIS 567

Query: 576  KTQRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDSTAVS 734
            + + DV  +PSLDKFLVKHVSRLE+EVQEAK+ RKNDLIE K K NS ST+VS
Sbjct: 568  QRKEDVLEVPSLDKFLVKHVSRLEKEVQEAKDRRKNDLIENK-KVNS-STSVS 618



 Score =  117 bits (292), Expect = 4e-24
 Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 8/166 (4%)
 Frame = +3

Query: 261 ARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKNHAQGGSVEENLEGSESRLDSMSS 440
           ++RK+ V E+PSLDKFLVKH+S+LE EVQEAK RRKN      + EN +        ++S
Sbjct: 567 SQRKEDVLEVPSLDKFLVKHVSRLEKEVQEAKDRRKN-----DLIENKK--------VNS 613

Query: 441 NVTTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFEMKSKQLGKT--------QRDVS 596
           + + SE             S+LEKE+   +K S +EF+  SK+L +         + DV 
Sbjct: 614 STSVSE-------------SELEKEVLQIRKNS-KEFKSDSKELERAPNRAISQRKEDVL 659

Query: 597 GLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDSTAVS 734
            +PSLDKFLVKHVSRLE+EVQEAKN RKNDL+E K K NS ST+VS
Sbjct: 660 EVPSLDKFLVKHVSRLEKEVQEAKNRRKNDLVENK-KVNS-STSVS 703



 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 62/177 (35%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
 Frame = +3

Query: 144  VENTKHHGSESGINSTKSCSLLGG--GTARRFSMDHSKIGPARRKQVVQELPSLDKFLVK 317
            VEN K + S S   S K+ S   G    A + ++D +K           E  SLDK LVK
Sbjct: 691  VENKKVNSSTSVSESEKNTSSCSGEAAAAEKENVDMNK-----------EEDSLDKILVK 739

Query: 318  HMSKLEIEVQEAKSRRKNHAQGGSVEENLEGSESRLDSMSSNVTTSEAVPDLGNVLLKHV 497
             + +LE E  +A S R NH  G    +N  G ++           +     L  VL+KHV
Sbjct: 740  PLHRLEREKMQASSLRNNH--GIRKHQNKLGGDN-----------AAGCEGLDKVLVKHV 786

Query: 498  SKLEKE-IEVAKKTSGREFEMKSKQLGKTQRDVSGLPSLDKFLVKHVSRLEREVQEA 665
            S+LEKE ++   K    E ++K+      QR ++   SLD+ LVKH SRLERE + A
Sbjct: 787  SRLEKEKMQFILKEEEEEMKVKASS-RNVQRQMNEQGSLDQILVKHKSRLEREKKMA 842


>ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|222849573|gb|EEE87120.1|
            predicted protein [Populus trichocarpa]
          Length = 756

 Score =  202 bits (513), Expect = 8e-50
 Identities = 132/278 (47%), Positives = 162/278 (58%), Gaps = 50/278 (17%)
 Frame = +3

Query: 36   KLVDVMLERLKCLQEDELASLATIVATCGLNAALLEVENTKHHGSESGINSTKSCSLLGG 215
            KLVDVMLERL+CL EDEL+SLATIVATCGLNAAL EVEN+K H      + T S +L   
Sbjct: 316  KLVDVMLERLRCLNEDELSSLATIVATCGLNAALAEVENSKVHDPVFAADYTSSQAL--- 372

Query: 216  GTARRFSMDHSKIGPARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKNHAQGGS-- 389
               RR S   S  G  RR +V   LPSLDKFLVKHMSKLE EVQEAK RR+N  + G+  
Sbjct: 373  NLPRRMSSVGS--GTMRRNEVRLGLPSLDKFLVKHMSKLEREVQEAKDRRRNELKAGNQG 430

Query: 390  --------------------------------------VEENLEGSESRLDSMS----SN 443
                                                  +EE  + S    + +S    S+
Sbjct: 431  NTDKTGDGKVNIDGKKTSKSIPDLGSILMKHSSKLEKEIEEAKKHSRKSFEIISKKPVSD 490

Query: 444  VTTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFEMKSKQLGKT----QRDVSGLPSL 611
            + TSE + DLG++L+KH SKLEKE+   +K SG+ F+M  K LG      ++DV  +PSL
Sbjct: 491  LITSEGISDLGSILIKHPSKLEKEVLEIRKNSGKTFDMDGKDLGGAINGQRKDVPEVPSL 550

Query: 612  DKFLVKHVSRLEREVQEAKNSRKNDLIE--RKSKPNSD 719
            DKFLVKHVS LE+EVQEAKN +KN+ +E  R  K N D
Sbjct: 551  DKFLVKHVSTLEKEVQEAKNRKKNESVEKGRVEKENVD 588



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 64/169 (37%), Positives = 88/169 (52%), Gaps = 24/169 (14%)
 Frame = +3

Query: 219  TARRFSMDHSKIGPA--RRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKNHA-QGGS 389
            + + F MD   +G A   +++ V E+PSLDKFLVKH+S LE EVQEAK+R+KN + + G 
Sbjct: 522  SGKTFDMDGKDLGGAINGQRKDVPEVPSLDKFLVKHVSTLEKEVQEAKNRKKNESVEKGR 581

Query: 390  VEEN----------LEGSESRLDSMSSNV-----------TTSEAVPDLGNVLLKHVSKL 506
            VE+           LEG + +  S  SN              +     L  VL+K VS+L
Sbjct: 582  VEKENVDLNKEENILEGEKMQALSSGSNCGNYRHQNKYGGNVTAGCEGLDRVLVKRVSRL 641

Query: 507  EKEIEVAKKTSGREFEMKSKQLGKTQRDVSGLPSLDKFLVKHVSRLERE 653
            EKE      +S  + EM  K+ G+     +    LD+ LVK  SRLERE
Sbjct: 642  EKE---KTASSLNQEEMNVKRSGRKVLTQTNEGDLDQILVKQKSRLERE 687



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
 Frame = +3

Query: 411 SESRLDSMSSNVTTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFE----MKSKQLGK 578
           +E  L S+++ V T      L  V     SK+   +  A  TS +       M S   G 
Sbjct: 329 NEDELSSLATIVATCGLNAALAEV---ENSKVHDPVFAADYTSSQALNLPRRMSSVGSGT 385

Query: 579 TQRDVS--GLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDST 725
            +R+    GLPSLDKFLVKH+S+LEREVQEAK+ R+N+L +  ++ N+D T
Sbjct: 386 MRRNEVRLGLPSLDKFLVKHMSKLEREVQEAKDRRRNEL-KAGNQGNTDKT 435


>ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|222846022|gb|EEE83569.1|
            predicted protein [Populus trichocarpa]
          Length = 785

 Score =  201 bits (512), Expect = 1e-49
 Identities = 125/272 (45%), Positives = 165/272 (60%), Gaps = 49/272 (18%)
 Frame = +3

Query: 33   TKLVDVMLERLKCLQEDELASLATIVATCGLNAALLEVENTKHHGSESGINSTKSCSLLG 212
            TK+VD+M ERL+CL EDEL+SLATIVATCGLNAAL EVEN+K H   S  + T S ++  
Sbjct: 309  TKIVDMMFERLRCLNEDELSSLATIVATCGLNAALAEVENSKVHDPGSAADYTSSQAV-- 366

Query: 213  GGTARRFSMDHSKIGPARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKNHAQGGSV 392
                RR S   S  G  RR +V  ELPSLDKFLVKH+SKLE EVQEAK RRKN  + G+ 
Sbjct: 367  -NRHRRMSSVGS--GTIRRNEVQLELPSLDKFLVKHVSKLEREVQEAKDRRKNELKEGNQ 423

Query: 393  ---------EENLEGSESRLDSMS------------------------------------ 437
                     +  L+G ++  +S+S                                    
Sbjct: 424  GNTDTTGDGKVTLDGKKTSSESISDLGTILVKHSSKLEKEIEEAKKNTRKSFKIISKKLA 483

Query: 438  SNVTTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFEMKSKQLGKT----QRDVSGLP 605
            S++T SE + DLG++L+KH SKLEKE++  +K SG+ F++  K+LG+     ++ V  +P
Sbjct: 484  SDLTISEGISDLGSMLIKHPSKLEKEVQEMRKNSGKTFDIDGKELGRAPNSPRKYVPEVP 543

Query: 606  SLDKFLVKHVSRLEREVQEAKNSRKNDLIERK 701
            SLDK LVKHVSRLE+EVQEAKN +KN+ +E +
Sbjct: 544  SLDKILVKHVSRLEKEVQEAKNRKKNESVEER 575



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 63/173 (36%), Positives = 88/173 (50%), Gaps = 28/173 (16%)
 Frame = +3

Query: 219  TARRFSMDHSKIG--PARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKNHAQGGSV 392
            + + F +D  ++G  P   ++ V E+PSLDK LVKH+S+LE EVQEAK+R+KN     SV
Sbjct: 517  SGKTFDIDGKELGRAPNSPRKYVPEVPSLDKILVKHVSRLEKEVQEAKNRKKNE----SV 572

Query: 393  EE--------NLEGSESRLDSMSS---------------NVTTSEAVPD---LGNVLLKH 494
            EE        NL   E+ L++  +               N     A  D   L  VL+KH
Sbjct: 573  EERRLEKENVNLNKEENGLETEKTQALSLGSSCGNYRHQNKFGGNATADCEGLDRVLVKH 632

Query: 495  VSKLEKEIEVAKKTSGREFEMKSKQLGKTQRDVSGLPSLDKFLVKHVSRLERE 653
             S+LEKE       S  + EM  ++ G+     +    LD+ LVKH S+LERE
Sbjct: 633  SSRLEKE---KMALSLNQEEMHVERSGRKAHMQTNEGGLDQILVKHKSKLERE 682


>ref|XP_003555288.1| PREDICTED: uncharacterized protein LOC100814684 [Glycine max]
          Length = 766

 Score =  191 bits (486), Expect = 1e-46
 Identities = 119/233 (51%), Positives = 148/233 (63%), Gaps = 3/233 (1%)
 Frame = +3

Query: 36  KLVDVMLERLKCLQEDELASLATIVATCGLNAALLEVENTKHHGSESGIN-STKSCSLLG 212
           KLVD+M+ERLKCLQEDEL+SLATIVAT GLNAAL EV+N+K H   S I  S+ S +   
Sbjct: 279 KLVDMMIERLKCLQEDELSSLATIVATYGLNAALAEVQNSKPHNPGSAIEYSSSSATNFP 338

Query: 213 GGTARRFSMDHSKIGPARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKNHAQGGSV 392
                   +  S +   R+KQ   ELPSLDKFLVKHM+KLE EV EAK  RKN       
Sbjct: 339 SRRMSSLGLGKSALDVMRKKQDEPELPSLDKFLVKHMTKLEREVWEAKKARKNE------ 392

Query: 393 EENLEGSESRLDSMSSNV--TTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFEMKSK 566
                 +ES  DS   +V  T  E VPDLG++L+K+ SKLEK+I+ AK  SG+E     +
Sbjct: 393 ------TESVRDSSRKSVDETPPEMVPDLGSILVKNYSKLEKDIKEAKIKSGKETPAVPR 446

Query: 567 QLGKTQRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDST 725
            +  +Q+D   +PSLDK LVKHVSRLE+EVQEAKN    +    K K + D+T
Sbjct: 447 GMPNSQKDHIEVPSLDKVLVKHVSRLEKEVQEAKNRTIKENRSLKKKADLDTT 499



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 16/157 (10%)
 Frame = +3

Query: 285 ELPSLDKFLVKHMSKLEIEVQEAKSR--RKNHA--------QGGSVEENLEGSESRLD-- 428
           E+PSLDK LVKH+S+LE EVQEAK+R  ++N +          G ++      E  LD  
Sbjct: 457 EVPSLDKVLVKHVSRLEKEVQEAKNRTIKENRSLKKKADLDTTGGLDSTFYSDEEALDRK 516

Query: 429 ---SMSSNVTTSEAVPD-LGNVLLKHVSKLEKEIEVAKKTSGREFEMKSKQLGKTQRDVS 596
              + ++ + + E+  D L  +L+K V +LE+E ++  ++ G   E   +++     +V+
Sbjct: 517 ENINSNTEINSGESKDDGLEKILIKPVHRLERE-KLHAQSLGSHVENYKQRMNHGATNVA 575

Query: 597 GLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSK 707
              SLDK LVKHVSRLE+E     +  +   ++R  +
Sbjct: 576 DCESLDKVLVKHVSRLEKEKMRINSGEEWGPVKRSPR 612


>ref|XP_002263699.1| PREDICTED: uncharacterized protein LOC100251578 [Vitis vinifera]
          Length = 814

 Score =  189 bits (480), Expect = 6e-46
 Identities = 128/303 (42%), Positives = 164/303 (54%), Gaps = 67/303 (22%)
 Frame = +3

Query: 30   STKLVDVMLERLKCLQEDELASLATIVATCGLNAALLEVENTKHHGSESG--------IN 185
            ++KLVD+MLER++CL+EDELASLATIVATCGLNAAL E EN K H  +          +N
Sbjct: 319  ASKLVDIMLERIRCLKEDELASLATIVATCGLNAALAEAENNKLHDPDPATDYAAGLTLN 378

Query: 186  STKSCSLLGGGTARRFSMDHSKIGPARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRR 365
              +  S  G  T +  SM +   G  ++K+   +LPSL + LVKHMSKLE EV EAK+ R
Sbjct: 379  FARRMSSFGTATTKTSSMHYFMDGQMKKKRAESQLPSLGECLVKHMSKLEREVLEAKNTR 438

Query: 366  KNHAQGGS-----------------------------------------VEENLEGS--- 413
            KN ++  S                                         +EE  + S   
Sbjct: 439  KNESKVRSGEIPDKFDDGKGDSDNNVTLFETIPDLGSILVKHSSKFEKEIEEGKKNSGEL 498

Query: 414  -ESRLDSMSSNVTTSEAVPDLGNVLLKHVSKLEKEIEVAKKTSGREFEMKSKQLGK---- 578
             E    ++ S+  +SEAVPDLG+VL+KH SKLEKE+E AK+     FE   K+ G+    
Sbjct: 499  FEMNCKNLDSDTASSEAVPDLGSVLIKHSSKLEKEMEEAKRKCDITFENNDKKFGRMPSR 558

Query: 579  ----TQRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIE------RKSKPNSDSTA 728
                 ++ V  +PSLDKFLVKHVSRLEREVQEAK+  KN  IE       K K NS S+ 
Sbjct: 559  VVSHRKQKVQEVPSLDKFLVKHVSRLEREVQEAKSRSKNCPIEGGNEVTLKKKVNSFSSI 618

Query: 729  VSS 737
              S
Sbjct: 619  THS 621



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
 Frame = +3

Query: 192  KSCSLLGGGTARRFSMDHSKIGPARRKQVVQELPSLDKFLVKHMSKLEIEVQEAKSRRKN 371
            + C +      ++F    S++  + RKQ VQE+PSLDKFLVKH+S+LE EVQEAKSR KN
Sbjct: 539  RKCDITFENNDKKFGRMPSRV-VSHRKQKVQEVPSLDKFLVKHVSRLEREVQEAKSRSKN 597

Query: 372  HAQGGSVEENLEGSESRLDSMSSNVTTSEAVPDLGNVLLK-------HVSKLEKEI---- 518
                G  E  L   + +++S SS   + E V    N+ L        +  K E  I    
Sbjct: 598  CPIEGGNEVTL---KKKVNSFSSITHSGENVCGKENIDLNKEVDGKFNTEKEESTINFLP 654

Query: 519  EVAKKTSG------REFEMKSKQLGKTQRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRK 680
            +  K  SG       +  +KSK++ K    V+   SLDK LVKH+SRLE+E  + + S K
Sbjct: 655  QDTKDCSGELCKQIEQENIKSKKM-KAMSSVADFESLDKVLVKHISRLEKE--KMRLSSK 711

Query: 681  NDLIERK 701
             ++++ K
Sbjct: 712  EEVLKVK 718


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