BLASTX nr result

ID: Coptis23_contig00028201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028201
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29431.3| unnamed protein product [Vitis vinifera]              218   1e-54
ref|XP_004172173.1| PREDICTED: uncharacterized protein LOC101230...   194   4e-47
ref|XP_004146799.1| PREDICTED: uncharacterized protein LOC101220...   194   4e-47
ref|XP_002510762.1| set domain protein, putative [Ricinus commun...   191   3e-46
ref|XP_002300607.1| SET domain protein [Populus trichocarpa] gi|...   184   3e-44

>emb|CBI29431.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  218 bits (556), Expect = 1e-54
 Identities = 127/336 (37%), Positives = 188/336 (55%), Gaps = 1/336 (0%)
 Frame = -1

Query: 1007 LPVYPVVNGGLINPVHLKFFRQFPEHVATGFAYWNTNLKPTLTGEHAINSGSCSSNVTSN 828
            LPVYPVVNG LINPV LK+F+QFP+HVATGFAY +  +  T+            +N+T++
Sbjct: 73   LPVYPVVNGNLINPVPLKYFKQFPDHVATGFAYLSAGISATIR----------PTNLTAH 122

Query: 827  EQVKSIDCSATPVAHNVSQQTPSSCDNYTSYGNQPPIQDAEATNIXXXXXXXXXXXXXAT 648
             Q  +++ +A                 Y    +QP +                       
Sbjct: 123  RQDGTVEFAALD-------------KGYLQSASQPCV----------------------- 146

Query: 647  PSAYLSSNTFGHEPQILDKEETNVASPNAPMSSEESCWVFDDEEGKRRGPHSLAELYSWH 468
                 S + +G + Q+ + E  N ++ N  +S E SCW+F+D EG++ GPHS AELYSWH
Sbjct: 147  -----SHSVYGFDGQMPNTEAANCSTSNPHLSGEASCWLFEDSEGRKHGPHSYAELYSWH 201

Query: 467  HYGYLRDSLTVYHMDSKFEPFTLISMVNAWRTNRAEIETPPDLKVNESSSSASFMTGISE 288
            HYGYL DS  +YH ++K  PFTL+SM+N WRT+R E     D + NE+ SS + M+ I+E
Sbjct: 202  HYGYLSDSSMIYHAENKCGPFTLLSMLNTWRTDRPETNPLSDGENNETGSSLNLMSEIAE 261

Query: 287  EVSNQLHLGIMRAARRLVLDEXXXXXXSDFAAAKKAEKHVKPDTTKQAAKFDDLAEKKAS 108
            EVS+QLH GI++A+RR +LDE      ++F A+KKA++  K +T  Q   F+  ++ + S
Sbjct: 262  EVSSQLHSGIIKASRRALLDEIISNIIAEFVASKKAQRLRKLETANQT--FNMCSDGRMS 319

Query: 107  N-VGEKKNYVVRRDGIAISPLSDLLLSNKVSRGSCE 3
              +G +KN V    G A+S  + L+  N+  + S E
Sbjct: 320  EIIGSRKNSVAPGGGTALSDQTCLI--NETPKESSE 353


>ref|XP_004172173.1| PREDICTED: uncharacterized protein LOC101230765, partial [Cucumis
            sativus]
          Length = 627

 Score =  194 bits (492), Expect = 4e-47
 Identities = 114/294 (38%), Positives = 156/294 (53%), Gaps = 4/294 (1%)
 Frame = -1

Query: 1007 LPVYPVVNGGLINPVHLKFFRQFPEHVATGFAYWNTNLKPT-LTGEHAINSGSCSSNVTS 831
            L VYPV NG L NPV LK+F+QFP+H+ATGFAY + ++    L G H   S +C  ++  
Sbjct: 154  LLVYPVFNGALTNPVPLKYFKQFPDHIATGFAYLSVDISNMGLNGNH---SDACKIDLAM 210

Query: 830  NEQVKSIDCSATPVAHNVSQQTPSSCDNYTSYGNQPPIQDAEATNIXXXXXXXXXXXXXA 651
            + Q   ++C   P   + SQ +P S      Y N                          
Sbjct: 211  HRQEGLVECGNPPTPCHDSQSSPLSF----GYEN-------------------------- 240

Query: 650  TPSAYLSSNTFGHEPQILDKEETNVASPNAPMSSEESCWVFDDEEGKRRGPHSLAELYSW 471
                       G   Q  + E   + + N P S E SCW+  D  G++ GP+SL +LYSW
Sbjct: 241  -----------GGSKQASNSELFCLTTSNLPSSVEGSCWLIMDHTGRKHGPYSLLQLYSW 289

Query: 470  HHYGYLRDSLTVYHMDSKFEPFTLISMVNAWRTNRAEIETP---PDLKVNESSSSASFMT 300
            H +GYL+DS+ +YH++SKF+PFTL S VNAW   +A I  P    DLK NES S   F++
Sbjct: 290  HQHGYLKDSVMIYHIESKFKPFTLFSAVNAW---KAAIPLPLFSSDLKTNESGSLLKFIS 346

Query: 299  GISEEVSNQLHLGIMRAARRLVLDEXXXXXXSDFAAAKKAEKHVKPDTTKQAAK 138
              SE VS+QLH GIM+AAR++VLDE       +F   KK+E+ +K + T Q  K
Sbjct: 347  ETSEGVSSQLHAGIMKAARKVVLDEIVGSIIGEFVTVKKSERQIKVEQTNQIMK 400


>ref|XP_004146799.1| PREDICTED: uncharacterized protein LOC101220062 [Cucumis sativus]
          Length = 1289

 Score =  194 bits (492), Expect = 4e-47
 Identities = 114/294 (38%), Positives = 156/294 (53%), Gaps = 4/294 (1%)
 Frame = -1

Query: 1007 LPVYPVVNGGLINPVHLKFFRQFPEHVATGFAYWNTNLKPT-LTGEHAINSGSCSSNVTS 831
            L VYPV NG L NPV LK+F+QFP+H+ATGFAY + ++    L G H   S +C  ++  
Sbjct: 154  LLVYPVFNGALTNPVPLKYFKQFPDHIATGFAYLSVDISNMGLNGNH---SDACKIDLAM 210

Query: 830  NEQVKSIDCSATPVAHNVSQQTPSSCDNYTSYGNQPPIQDAEATNIXXXXXXXXXXXXXA 651
            + Q   ++C   P   + SQ +P S      Y N                          
Sbjct: 211  HRQEGLVECGNPPTPCHDSQSSPLSF----GYEN-------------------------- 240

Query: 650  TPSAYLSSNTFGHEPQILDKEETNVASPNAPMSSEESCWVFDDEEGKRRGPHSLAELYSW 471
                       G   Q  + E   + + N P S E SCW+  D  G++ GP+SL +LYSW
Sbjct: 241  -----------GGSKQASNSELFCLTTSNLPSSVEGSCWLIMDHTGRKHGPYSLLQLYSW 289

Query: 470  HHYGYLRDSLTVYHMDSKFEPFTLISMVNAWRTNRAEIETP---PDLKVNESSSSASFMT 300
            H +GYL+DS+ +YH++SKF+PFTL S VNAW   +A I  P    DLK NES S   F++
Sbjct: 290  HQHGYLKDSVMIYHIESKFKPFTLFSAVNAW---KAAIPLPLFSSDLKTNESGSLLKFIS 346

Query: 299  GISEEVSNQLHLGIMRAARRLVLDEXXXXXXSDFAAAKKAEKHVKPDTTKQAAK 138
              SE VS+QLH GIM+AAR++VLDE       +F   KK+E+ +K + T Q  K
Sbjct: 347  ETSEGVSSQLHAGIMKAARKVVLDEIVGSIIGEFVTVKKSERQIKVEQTNQIMK 400


>ref|XP_002510762.1| set domain protein, putative [Ricinus communis]
            gi|223551463|gb|EEF52949.1| set domain protein, putative
            [Ricinus communis]
          Length = 1258

 Score =  191 bits (484), Expect = 3e-46
 Identities = 119/345 (34%), Positives = 170/345 (49%), Gaps = 10/345 (2%)
 Frame = -1

Query: 1007 LPVYPVVNGGLINPVHLKFFRQFPEHVATGFAYWNTNLKPTLTGEHAINSGSCSSNVTSN 828
            LPVYPV+NG L+NPV LK+F QFP+HVATGFAY    +  T        S S  S +   
Sbjct: 156  LPVYPVLNGTLVNPVPLKYFNQFPDHVATGFAYLGIGISGTSMPMSHFTSVSMDSAIHRQ 215

Query: 827  EQVKSIDCSATPVAHNVSQQTPSSCDNYTSYGNQPPIQDAEATNIXXXXXXXXXXXXXAT 648
            E           V H       S      S+ + P                         
Sbjct: 216  EGC---------VPHAAQVSLCSDAQEMVSHSHVP------------------------- 241

Query: 647  PSAYLSSNTFGHEPQILDKEETNVASPNAPMSSEESCWVFDDEEGKRRGPHSLAELYSWH 468
                   NT G    + +    +   P + +S E+SCW+F+D+ G++ GPHSL+ELYSWH
Sbjct: 242  ------HNTCGSNQPVSNSMAASHDIPFSLLSGEDSCWMFEDDGGRKHGPHSLSELYSWH 295

Query: 467  HYGYLRDSLTVYHMDSKFEPFTLISMVNAWRTNRAEIETPPDLKVNESSSSASFMTGISE 288
             +GYLR+SLT+YH+ +KF PF L+S+++AW T++ E     D +  E  S  SF++ ISE
Sbjct: 296  RHGYLRNSLTIYHIQNKFRPFPLLSVIDAWSTDKHESVLASDAE-GEMGSLCSFVSEISE 354

Query: 287  EVSNQLHLGIMRAARRLVLDEXXXXXXSDFAAAKKAEKHVKPDTTKQAAKFDDLAEKKAS 108
            EVS QLH GIM+AARR+ LDE      S+F   KK+ +++K         F      ++ 
Sbjct: 355  EVSCQLHAGIMKAARRVALDEIISNVMSEFFDTKKSHRNLKRSPITTLCLF-----YQSE 409

Query: 107  NVGEKKNYVV----------RRDGIAISPLSDLLLSNKVSRGSCE 3
              GE++N+ V            D   +  +S+LL  N  S G+ +
Sbjct: 410  VTGERRNHAVPECKPAAFSHNSDQACVDGMSELLPKNTKSVGTID 454


>ref|XP_002300607.1| SET domain protein [Populus trichocarpa] gi|222842333|gb|EEE79880.1|
            SET domain protein [Populus trichocarpa]
          Length = 1390

 Score =  184 bits (467), Expect = 3e-44
 Identities = 116/333 (34%), Positives = 177/333 (53%), Gaps = 3/333 (0%)
 Frame = -1

Query: 1007 LPVYPVVNGGLINPVHLKFFRQFPEHVATGFAYWNTNLK-PTLTGEHAINSGSCSSNVTS 831
            LPVYP+ NG LINPV L +F+QFP+HV+TGF Y        T+   H        +++ +
Sbjct: 135  LPVYPIANGILINPVPLNYFKQFPDHVSTGFTYLCLGTSGTTMPTNHP-------TDLAA 187

Query: 830  NEQVKSIDCSATPVAH-NVSQQTPSSCDNYTSYGNQPPIQDAEATNIXXXXXXXXXXXXX 654
            + Q + +  +A   AH ++   + S   N+T   NQP                       
Sbjct: 188  HRQ-EGVQYAAPVSAHPDIESISDSRVRNHTYSFNQP----------------------- 223

Query: 653  ATPSAYLSSNTFGHEPQILDKEETNVASPNAPMSSEESCWVFDDEEGKRRGPHSLAELYS 474
                             I + E  +  +P + +S E+SCW+F D++G++ GPHSL ELYS
Sbjct: 224  -----------------ISNSEAADYVTPVSLVSGEDSCWLFKDDDGRKHGPHSLLELYS 266

Query: 473  WHHYGYLRDSLTVYHMDSKFEPFTLISMVNAWRTNRAEIETPPDLKVNESSSSASFMTGI 294
            W+ YGYL+DSL +YH  +KF P  L+S++NAWR ++ E  +  D    E+ SS SF++ I
Sbjct: 267  WYQYGYLKDSLMIYHAQNKFRPLPLLSIMNAWRLDKPESFSMTD-ATTETGSSQSFISVI 325

Query: 293  SEEVSNQLHLGIMRAARRLVLDEXXXXXXSDFAAAKKAEKHVKPDTTKQAAKFDDLAEKK 114
            SEEVS+QLH GI++AARR  LDE      S+F   K+AE+++  D   QAAK   +  K 
Sbjct: 326  SEEVSSQLHSGILKAARRFALDEIICDVISEFVRTKRAERYLMLD--NQAAKTCSVDGKM 383

Query: 113  ASNVGEKKNYVVRR-DGIAISPLSDLLLSNKVS 18
            + +  E+  +     D  A + +SD   ++++S
Sbjct: 384  SQSASERMIFSTPECDAAACNYISDQTWADELS 416


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