BLASTX nr result
ID: Coptis23_contig00028097
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028097 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002298693.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002329863.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 emb|CAN80975.1| hypothetical protein VITISV_039739 [Vitis vinifera] 59 4e-07 emb|CAN59866.1| hypothetical protein VITISV_013438 [Vitis vinifera] 57 1e-06 >ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|222873215|gb|EEF10346.1| predicted protein [Populus trichocarpa] Length = 307 Score = 63.9 bits (154), Expect = 1e-08 Identities = 28/62 (45%), Positives = 40/62 (64%) Frame = +3 Query: 180 TSIKLDNKNYLAWSQAVRVFLRAKMKHNYLTDDPPDENSPSVETWWSEMSMVMT*LWHSM 359 +S +L+ +NYL WSQ V+ FL+ K K N+L D+PP P W E SM+M+ LW+S+ Sbjct: 20 SSYRLNGRNYLKWSQIVKTFLKGKGKINHLMDNPPSPEDPKFTLWDEEDSMIMSWLWNSI 79 Query: 360 EP 365 P Sbjct: 80 MP 81 >ref|XP_002298693.1| predicted protein [Populus trichocarpa] gi|222845951|gb|EEE83498.1| predicted protein [Populus trichocarpa] Length = 299 Score = 63.9 bits (154), Expect = 1e-08 Identities = 28/62 (45%), Positives = 40/62 (64%) Frame = +3 Query: 180 TSIKLDNKNYLAWSQAVRVFLRAKMKHNYLTDDPPDENSPSVETWWSEMSMVMT*LWHSM 359 +S +L+ +NYL WSQ V+ FL+ K K N+L D+PP P W E SM+M+ LW+S+ Sbjct: 20 SSYRLNGRNYLKWSQIVKTFLKGKGKINHLMDNPPSPEDPKFTLWDEEDSMIMSWLWNSI 79 Query: 360 EP 365 P Sbjct: 80 MP 81 >ref|XP_002329863.1| predicted protein [Populus trichocarpa] gi|222871100|gb|EEF08231.1| predicted protein [Populus trichocarpa] Length = 96 Score = 60.8 bits (146), Expect = 1e-07 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +3 Query: 180 TSIKLDNKNYLAWSQAVRVFLRAKMKHNYLTDDPPDENSPSVETWWSEMSMVMT*LWHSM 359 +S +L+ +NYL WS+ V+ FL+ K K N+L D+PP P W E SM+++ LW+S+ Sbjct: 20 SSYRLNERNYLKWSKIVKTFLKGKGKINHLMDNPPSPEDPKFTLWDEEDSMIISWLWNSI 79 Query: 360 EP 365 P Sbjct: 80 MP 81 >emb|CAN80975.1| hypothetical protein VITISV_039739 [Vitis vinifera] Length = 274 Score = 58.9 bits (141), Expect = 4e-07 Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Frame = +3 Query: 90 GKNSSLVISGQSSNSNQPPRYFH--DDIGKQITSIKLDNKNYLAWSQAVRVFLRAKMKHN 263 G N IS ++ +++QP F D+ QIT+ KL+ KNYL WSQ++++ + ++ K Sbjct: 23 GDNPKSEISDKT-HADQPVTAFPGGDNSSLQITAHKLNGKNYLQWSQSIKIVICSRGKFK 81 Query: 264 YLTDD--PPDENSPSVETWWSEMSMVMT*LWHSMEP 365 Y+T + P +P+ + W++E S+V T L +SMEP Sbjct: 82 YITGEAKAPAPTAPAYKKWFAENSIVHTWLINSMEP 117 >emb|CAN59866.1| hypothetical protein VITISV_013438 [Vitis vinifera] Length = 1040 Score = 57.4 bits (137), Expect = 1e-06 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Frame = +3 Query: 87 TGKNSSLVISGQSSNSNQPPRYF-HDDIGKQITSIKLDNKNYLAWSQAVRVFLRAKMKHN 263 + ++ S+ + S++NQ F + D QIT+ +L+ KNYL WSQ+V + + + K Sbjct: 5 SSQDDSIATTSDQSHANQSVMTFPNGDNSLQITAHRLNGKNYLQWSQSVNIVICGRGKFE 64 Query: 264 YLTDD--PPDENSPSVETWWSEMSMVMT*LWHSMEP 365 YLT + P P+ + W++E S++ L +SMEP Sbjct: 65 YLTGEANAPAATDPTYKIWFAENSIMHAWLINSMEP 100