BLASTX nr result

ID: Coptis23_contig00027770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027770
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166350.1| PREDICTED: uncharacterized LOC101205896 [Cuc...    77   1e-12
ref|XP_004140028.1| PREDICTED: uncharacterized protein LOC101205...    77   1e-12
ref|NP_001105597.1| terminal acidic SANT 1 [Zea mays] gi|5411143...    75   7e-12
ref|XP_003525891.1| PREDICTED: uncharacterized protein LOC100777...    74   2e-11
ref|XP_002276395.2| PREDICTED: uncharacterized protein LOC100244...    71   1e-10

>ref|XP_004166350.1| PREDICTED: uncharacterized LOC101205896 [Cucumis sativus]
          Length = 559

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = -2

Query: 210 NRPHLPSPRRRLVSPLKRKPNRILTGRRKPKKWSLFEEQALIDAVKEYGRGNWSVILHNN 31
           NR HLPSP+R+ +SPLK+     +  RR+ KKWSL EE  L  AV+ +G+GNW +IL + 
Sbjct: 478 NRLHLPSPKRKDISPLKKYEETKVVRRRQCKKWSLLEEDTLRTAVQRFGKGNWKLILSSY 537

Query: 30  RELFEERT 7
           R++F+ERT
Sbjct: 538 RDIFDERT 545


>ref|XP_004140028.1| PREDICTED: uncharacterized protein LOC101205896 [Cucumis sativus]
          Length = 559

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = -2

Query: 210 NRPHLPSPRRRLVSPLKRKPNRILTGRRKPKKWSLFEEQALIDAVKEYGRGNWSVILHNN 31
           NR HLPSP+R+ +SPLK+     +  RR+ KKWSL EE  L  AV+ +G+GNW +IL + 
Sbjct: 478 NRLHLPSPKRKDISPLKKYEETKVVRRRQCKKWSLLEEDTLRTAVQRFGKGNWKLILSSY 537

Query: 30  RELFEERT 7
           R++F+ERT
Sbjct: 538 RDIFDERT 545


>ref|NP_001105597.1| terminal acidic SANT 1 [Zea mays] gi|54111435|gb|AAV28560.1|
           terminal acidic SANT 1 [Zea mays]
           gi|195641250|gb|ACG40093.1| terminal acidic SANT 1 [Zea
           mays] gi|238009934|gb|ACR36002.1| unknown [Zea mays]
           gi|413943063|gb|AFW75712.1| terminal acidic SANT 1 [Zea
           mays]
          Length = 422

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/69 (56%), Positives = 44/69 (63%)
 Frame = -2

Query: 213 PNRPHLPSPRRRLVSPLKRKPNRILTGRRKPKKWSLFEEQALIDAVKEYGRGNWSVILHN 34
           P RPHLPSPRR   SPL    N+    RRK ++WSLFEE+ L   V+EYG GNW  IL N
Sbjct: 341 PPRPHLPSPRRLPPSPLSPPGNKN-NNRRKARRWSLFEEETLRKGVEEYGVGNWRDILDN 399

Query: 33  NRELFEERT 7
           N E F  RT
Sbjct: 400 NAEAFTGRT 408


>ref|XP_003525891.1| PREDICTED: uncharacterized protein LOC100777809 [Glycine max]
          Length = 493

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/67 (52%), Positives = 48/67 (71%)
 Frame = -2

Query: 207 RPHLPSPRRRLVSPLKRKPNRILTGRRKPKKWSLFEEQALIDAVKEYGRGNWSVILHNNR 28
           R +LPSP+ R VSPL +     +T RRK KKWS  EE+ L  AV ++GRGNW +IL +++
Sbjct: 415 RFNLPSPKGRKVSPLNKYKPANITKRRKVKKWSQLEEETLRTAVDKFGRGNWKLILDSHK 474

Query: 27  ELFEERT 7
           ++FEERT
Sbjct: 475 DIFEERT 481


>ref|XP_002276395.2| PREDICTED: uncharacterized protein LOC100244907 [Vitis vinifera]
           gi|297745761|emb|CBI15817.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/64 (51%), Positives = 46/64 (71%)
 Frame = -2

Query: 198 LPSPRRRLVSPLKRKPNRILTGRRKPKKWSLFEEQALIDAVKEYGRGNWSVILHNNRELF 19
           LPSP+R+ VSPLK+     L  RR+ KKWS+ EE  L   V ++G+GNW++IL+  R++F
Sbjct: 402 LPSPKRKAVSPLKKYEITKLAKRRQMKKWSILEEDTLRTGVLKFGKGNWTLILNCYRDIF 461

Query: 18  EERT 7
           EERT
Sbjct: 462 EERT 465


Top