BLASTX nr result

ID: Coptis23_contig00027629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027629
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...    62   5e-08
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    60   2e-07
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]    59   5e-07
ref|XP_002526114.1| receptor-kinase, putative [Ricinus communis]...    58   7e-07
gb|EEC66712.1| hypothetical protein OsI_33040 [Oryza sativa Indi...    57   2e-06

>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = -3

Query: 279 GLFQNANAVTVVGNDKLCGGDPELHLLKCQIRESKKRGAHLTLKV----TXXXXXXXXXX 112
           G+F+N +A +++GN KLCGG PE  L KC ++E KKRG  L LK+               
Sbjct: 540 GVFKNVSATSIMGNSKLCGGIPEFQLPKCNLQEPKKRGLSLALKIIIATVSGLLAITCVL 599

Query: 111 XXXXXLYMRQPKKVPTSNACPDNGFVRVSYSELHKAT 1
                L++R+ K  P S++  +   ++VSY  L +AT
Sbjct: 600 SFLIFLWLRKKKGEPASSS-SEKSLLKVSYQSLLRAT 635


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = -3

Query: 279  GLFQNANAVTVVGNDKLCGGDPELHLLKCQIRESKK--RGAHLTLK----VTXXXXXXXX 118
            G+F+N + +++ GN+KLCGG P+L L  C I  S K  +G HL++K    ++        
Sbjct: 927  GVFKNVSGISITGNNKLCGGIPQLQLPPCPIVASAKHGKGKHLSIKIIIAISIAGVSCLA 986

Query: 117  XXXXXXXLYMRQPKKVPTSNACPDNGFVRVSYSELHKAT 1
                    Y R+   + +S+     G++RVSY+EL KAT
Sbjct: 987  FIVASVLFYRRKKTTMKSSSTSLGYGYLRVSYNELLKAT 1025


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = -3

Query: 279  GLFQNANAVTVVGNDKLCGGDPELHLLKCQIRESKKRGAHLTLKVTXXXXXXXXXXXXXX 100
            G+F+NA+A+++ GND+LCGG PEL L +C   + +K+   LTLK+T              
Sbjct: 1552 GVFRNASAISIAGNDRLCGGIPELQLPRCSKDQKRKQKMSLTLKLT--IPIGLSGIILMS 1609

Query: 99   XLYMRQPKKV----PTSNACPDNGFVRVSYSELHKAT 1
             + +R+ KKV    P+ +   D  F+ +SY  L KAT
Sbjct: 1610 CIILRRLKKVSKGQPSESLLQDR-FMNISYGLLVKAT 1645



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
 Frame = -3

Query: 279 GLFQNANAVTVVGNDKLCGGDPELHLLKCQIRESK----KRGAHLTLKVTXXXXXXXXXX 112
           G+F NA + +V GN+KLCGG PELHL  C + + K    KRG  L + +           
Sbjct: 644 GVFNNATSTSVAGNNKLCGGIPELHLPACPVTKPKTGESKRGLKLMIGLLTGFLGLVLIM 703

Query: 111 XXXXXLYMRQPKKVPTSNACPDNGFV-RVSYSELHKAT 1
                  +R+ K+ P+  +      +  VSY  L KAT
Sbjct: 704 SLLVINRLRRVKREPSQTSASSKDLILNVSYDGLFKAT 741


>ref|XP_002526114.1| receptor-kinase, putative [Ricinus communis]
           gi|223534611|gb|EEF36308.1| receptor-kinase, putative
           [Ricinus communis]
          Length = 1033

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/93 (35%), Positives = 45/93 (48%)
 Frame = -3

Query: 279 GLFQNANAVTVVGNDKLCGGDPELHLLKCQIRESKKRGAHLTLKVTXXXXXXXXXXXXXX 100
           G+F+NA++ +V+GN+KLCGG  + HLL C IR S  R   L   +               
Sbjct: 609 GVFKNASSTSVMGNNKLCGGVSDFHLLACNIRSSTNRRLKLKAIIASVAVLLGALLMLSF 668

Query: 99  XLYMRQPKKVPTSNACPDNGFVRVSYSELHKAT 1
            L +R  KK        +   +RVSY  LH AT
Sbjct: 669 LLILRSRKKSQAPALSSEIPLLRVSYQNLHDAT 701


>gb|EEC66712.1| hypothetical protein OsI_33040 [Oryza sativa Indica Group]
          Length = 964

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
 Frame = -3

Query: 279 GLFQNANAVTVVGNDKLCGGDPELHLLKCQIRESKKRGAHLTLKVTXXXXXXXXXXXXXX 100
           G+F NA A+++ GNDKLCGG P+LHL  C     K+R     + V               
Sbjct: 555 GVFANATAISIQGNDKLCGGIPDLHLPPCSSESGKRRHKFPLIPVVSLAATIFILSLISA 614

Query: 99  XLYMRQP-KKVPTSNACPDNGFVRVSYSELHKAT 1
            L+ R+P +K+P++ +    G+  +SY ++ +AT
Sbjct: 615 FLFWRKPMRKLPSATSM--QGYPLISYQQIVRAT 646


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