BLASTX nr result

ID: Coptis23_contig00027612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027612
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70132.1| hypothetical protein VITISV_030400 [Vitis vinifera]    71   8e-11
ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...    69   3e-10
ref|XP_002511034.1| ankyrin repeat-containing protein, putative ...    64   1e-08
ref|XP_002321784.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>emb|CAN70132.1| hypothetical protein VITISV_030400 [Vitis vinifera]
          Length = 394

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/59 (59%), Positives = 46/59 (77%), Gaps = 4/59 (6%)
 Frame = -1

Query: 165 LLKEQLF*VYGVALTSVENPLHVAAMAGHLSFVKEMILLKP----ELNQDGFSPIHVAA 1
           LL+E    ++  ALTS ENPLH+++++GH+ FVKE+I LKP    ELNQDGFSPIH+AA
Sbjct: 20  LLRENPLILHTTALTSAENPLHISSISGHVDFVKELIRLKPDFIKELNQDGFSPIHMAA 78


>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At2g01680-like [Vitis vinifera]
          Length = 450

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 4/59 (6%)
 Frame = -1

Query: 165 LLKEQLF*VYGVALTSVENPLHVAAMAGHLSFVKEMILLKP----ELNQDGFSPIHVAA 1
           LL+E    ++  AL S ENPLH+++++GH+ FVKE+I LKP    ELNQDGFSPIH+AA
Sbjct: 20  LLRENPLILHTTALASAENPLHISSISGHVDFVKELIRLKPDFIKELNQDGFSPIHMAA 78


>ref|XP_002511034.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223550149|gb|EEF51636.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 320

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
 Frame = -1

Query: 165 LLKEQLF*VYGVALTSVENPLHVAAMAGHLSFVKEMILLKP----ELNQDGFSPIHVAA 1
           LL E    +   AL S ENPLH+A++AGH+ FVK+++ LKP    ELNQDG+SP+H+AA
Sbjct: 20  LLAENPLILLSTALFSSENPLHIASIAGHVDFVKDLLRLKPEFAQELNQDGYSPMHMAA 78


>ref|XP_002321784.1| predicted protein [Populus trichocarpa] gi|222868780|gb|EEF05911.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
 Frame = -1

Query: 141 VYGVALTSVENPLHVAAMAGHLSFVKEMILLKP----ELNQDGFSPIHVAA 1
           +  + L S ENPL++AA  GH+ FVKE+I LKP    E+NQ+GFSP H+AA
Sbjct: 27  ILNITLLSAENPLNIAADMGHVDFVKEIIKLKPVFAKEVNQEGFSPTHIAA 77


>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
 Frame = -1

Query: 165 LLKEQLF*VYGVALTSVENPLHVAAMAGHLSFVKEMILLKP----ELNQDGFSPIHVAA 1
           LL E    +  ++L S ENPLH++++AGHL   +E+   KP    ELNQDGFSP+H+A+
Sbjct: 20  LLAEDPLILDRISLNSTENPLHLSSLAGHLEITREVACQKPAFARELNQDGFSPVHIAS 78


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