BLASTX nr result

ID: Coptis23_contig00027314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027314
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282114.1| PREDICTED: uncharacterized protein LOC100249...   107   1e-21
emb|CBI23718.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CAN66082.1| hypothetical protein VITISV_028832 [Vitis vinifera]   107   1e-21
ref|XP_002312604.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
gb|AAZ31069.1| unknown [Medicago sativa]                               94   1e-17

>ref|XP_002282114.1| PREDICTED: uncharacterized protein LOC100249317 [Vitis vinifera]
          Length = 420

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/84 (60%), Positives = 62/84 (73%)
 Frame = +1

Query: 43  MWRRLSLTITSKTSNLRFFSTAIRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 222
           MW R  L  TSK   LR FSTA+R++   IEDEGDWFYSSEWWG  S+GHTV RS+SDKG
Sbjct: 3   MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 56

Query: 223 NGIISVVSHPCSKPDIVQWTSMEK 294
           NG++SVV+H  S+P  + W  ME+
Sbjct: 57  NGVVSVVAHHSSRPSEIHWPGMER 80


>emb|CBI23718.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/84 (60%), Positives = 62/84 (73%)
 Frame = +1

Query: 43  MWRRLSLTITSKTSNLRFFSTAIRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 222
           MW R  L  TSK   LR FSTA+R++   IEDEGDWFYSSEWWG  S+GHTV RS+SDKG
Sbjct: 1   MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 54

Query: 223 NGIISVVSHPCSKPDIVQWTSMEK 294
           NG++SVV+H  S+P  + W  ME+
Sbjct: 55  NGVVSVVAHHSSRPSEIHWPGMER 78


>emb|CAN66082.1| hypothetical protein VITISV_028832 [Vitis vinifera]
          Length = 418

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/84 (60%), Positives = 62/84 (73%)
 Frame = +1

Query: 43  MWRRLSLTITSKTSNLRFFSTAIRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 222
           MW R  L  TSK   LR FSTA+R++   IEDEGDWFYSSEWWG  S+GHTV RS+SDKG
Sbjct: 1   MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 54

Query: 223 NGIISVVSHPCSKPDIVQWTSMEK 294
           NG++SVV+H  S+P  + W  ME+
Sbjct: 55  NGVVSVVAHHSSRPSEIHWPGMER 78


>ref|XP_002312604.1| predicted protein [Populus trichocarpa] gi|222852424|gb|EEE89971.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/84 (55%), Positives = 56/84 (66%)
 Frame = +1

Query: 43  MWRRLSLTITSKTSNLRFFSTAIRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 222
           MW R  L  T      R   TA RR    I+DEGDWFYSSEWWGT ++GHTV RS SDKG
Sbjct: 1   MWHRARLIST------RRLCTATRR---CIDDEGDWFYSSEWWGTCTDGHTVLRSPSDKG 51

Query: 223 NGIISVVSHPCSKPDIVQWTSMEK 294
           NGI+SV+++P S+P  V+W   EK
Sbjct: 52  NGIVSVLAYPSSRPSEVEWRETEK 75


>gb|AAZ31069.1| unknown [Medicago sativa]
          Length = 135

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +1

Query: 43  MWRRLSLTITSKTSNLRFFSTAIRRNGSLIEDEGDWFYSSEWWGTYSE-GHTVFRSSSDK 219
           MWRR         S LR FSTA+RR     EDEGDWFY+SEWWG+ S+ G TV RS+S K
Sbjct: 1   MWRRGR----EGFSRLRRFSTAVRRCS---EDEGDWFYASEWWGSGSDDGQTVLRSTSGK 53

Query: 220 GNGIISVVSHPCSKPDIVQWTSMEK 294
           GNGI+SV++HP SKP+ + W+ ME+
Sbjct: 54  GNGIVSVIAHPSSKPNRMHWSKMER 78


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