BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025365
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   158   5e-37
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   150   1e-34
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   148   5e-34
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   148   5e-34

>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  158 bits (400), Expect = 5e-37
 Identities = 77/166 (46%), Positives = 107/166 (64%)
 Frame = -2

Query: 498 FVEIDRSSWTSDEHLDIAEVIVTDIRPRGKLLSYGLTEDVYMDSKYGFRFRLRNVEDYSE 319
           FVE+DRS W SDEHLDI+E+++ D+        + L+ED Y D ++  RFRL N+     
Sbjct: 44  FVEVDRSGWLSDEHLDISEIVLRDLNIGEGFYGFELSEDFYQDPQFSLRFRLCNIGSDLG 103

Query: 318 RIKLGHWPKVETDNIFLEFIDTSKVEDSEKDDVVFSGNFDGPDDGVSGLAHLVSQXXXXX 139
           RIKLGHWP +   +I LEF+  + V+D+E   V+ SG FDGPD+ VSGL HL S      
Sbjct: 104 RIKLGHWPVLPYTDIHLEFVKRASVDDTETCTVLLSGIFDGPDESVSGLVHLASMKFVTL 163

Query: 138 XXXXXXXXXEDALILTMRVEILRSAFDACDSLLDVTRQPWKRSMVS 1
                    +D   L MRVE+L+SAFDAC+SL++ +R+PWK+SM++
Sbjct: 164 RAVLGIKLSDDIPSLRMRVEVLKSAFDACESLIEGSRKPWKKSMMN 209


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  150 bits (380), Expect = 1e-34
 Identities = 77/166 (46%), Positives = 105/166 (63%)
 Frame = -2

Query: 498 FVEIDRSSWTSDEHLDIAEVIVTDIRPRGKLLSYGLTEDVYMDSKYGFRFRLRNVEDYSE 319
           FVE+DR  W S EHLDI+EV+++D+  R     + L+ED Y D +Y  RF++ NV +   
Sbjct: 50  FVEVDRCGWLSSEHLDISEVVLSDLNLREGFSGFELSEDFYRDQQYLLRFQVCNVSNVLG 109

Query: 318 RIKLGHWPKVETDNIFLEFIDTSKVEDSEKDDVVFSGNFDGPDDGVSGLAHLVSQXXXXX 139
           RIKLGHWP +   +I LEF+    ++  E   V+ SG FDGPD+GV+GL HL S      
Sbjct: 110 RIKLGHWPVIPYTDIHLEFVRRVTIDHVETYTVLLSGIFDGPDEGVTGLLHLASLKFVTL 169

Query: 138 XXXXXXXXXEDALILTMRVEILRSAFDACDSLLDVTRQPWKRSMVS 1
                    E+   L +RVE+L+SAFDAC+SLLD +RQ WK+SMV+
Sbjct: 170 RPVLGARLSEEISSLRIRVEVLKSAFDACESLLDSSRQLWKKSMVN 215


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  148 bits (374), Expect = 5e-34
 Identities = 79/170 (46%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
 Frame = -2

Query: 507 TSRFVEIDRSSWTSDEHLDIAEVIVTDIRPRGKLLSYGLTEDVYMDSKYGFRFRLRNVED 328
           T  FVE+DR+ W S EHLDI+E+++ D+  R +   Y L E  Y +SK   RFRL N   
Sbjct: 46  TPLFVEVDRTGWGSGEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQ 105

Query: 327 YSERIKLGHWPKVETDNIFLEFIDTSKVEDS-EKDDVVFSGNFDGPDDGVSGLAHLVSQX 151
           +  RI+LGHWP V   +I LEF++    E+  E D V+ SG FDGPD+GVSGL HL    
Sbjct: 106 FVGRIRLGHWPVVAASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLK 165

Query: 150 XXXXXXXXXXXXXEDALILTMRVEILRSAFDACDSLLDVTRQPWKRSMVS 1
                        E    + +RVEILR+AFDAC+SLLD +R  WK+SM+S
Sbjct: 166 LLTLRPVLGVTFSEGVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMS 215


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  148 bits (374), Expect = 5e-34
 Identities = 79/170 (46%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
 Frame = -2

Query: 507 TSRFVEIDRSSWTSDEHLDIAEVIVTDIRPRGKLLSYGLTEDVYMDSKYGFRFRLRNVED 328
           T  FVE+DR+ W S EHLDI+E+++ D+  R +   Y L E  Y +SK   RFRL N   
Sbjct: 46  TPLFVEVDRTGWGSGEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQ 105

Query: 327 YSERIKLGHWPKVETDNIFLEFIDTSKVEDS-EKDDVVFSGNFDGPDDGVSGLAHLVSQX 151
           +  RI+LGHWP V   +I LEF++    E+  E D V+ SG FDGPD+GVSGL HL    
Sbjct: 106 FVGRIRLGHWPVVAASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLK 165

Query: 150 XXXXXXXXXXXXXEDALILTMRVEILRSAFDACDSLLDVTRQPWKRSMVS 1
                        E    + +RVEILR+AFDAC+SLLD +R  WK+SM+S
Sbjct: 166 LLTLRPVLGVTFSEGVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMS 215


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  148 bits (374), Expect = 5e-34
 Identities = 77/168 (45%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
 Frame = -2

Query: 498 FVEIDRSSWTSDEHLDIAEVIVTDIRPRGKLLSYGLTEDVYMDSKYGFRFRLRNV-EDYS 322
           FVE++R+SW S+ H D +E+++  +  R +  S+ +T+  Y DSKY  RFR+ NV +   
Sbjct: 54  FVEVERNSWASNHHRDASELVLHGLNLRQEYSSFRVTDGFYHDSKYSLRFRVSNVKQSVL 113

Query: 321 ERIKLGHWPKVETDNIFLEFIDTSKV-EDSEKDDVVFSGNFDGPDDGVSGLAHLVSQXXX 145
            RIKLGHWP   + +I LE I+ S V ED E + V+FSG+FDGPD+G++GL HL +    
Sbjct: 114 SRIKLGHWPVFSSSDISLELIEKSMVEEDREVESVIFSGSFDGPDEGITGLVHLTNMEFL 173

Query: 144 XXXXXXXXXXXEDALILTMRVEILRSAFDACDSLLDVTRQPWKRSMVS 1
                      E    L MRVEIL  AFDAC+SLL+ TRQ WK+SM++
Sbjct: 174 TLRPVLGVDFSEKMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMN 221