BLASTX nr result

ID: Coptis23_contig00025354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025354
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   413   e-113
ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   402   e-110
emb|CBI41050.3| unnamed protein product [Vitis vinifera]              402   e-110

>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  413 bits (1062), Expect = e-113
 Identities = 214/331 (64%), Positives = 249/331 (75%), Gaps = 7/331 (2%)
 Frame = -2

Query: 972  SGSTSLNESSQVSAWLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPGIPAV 796
            +G+TS   S+Q+ AW+QGAIAKI+ST DGVS+   NP+S PS+F PISINTGTFPG PAV
Sbjct: 852  NGTTSSTGSTQMQAWVQGAIAKISSTNDGVSNATPNPISGPSSFMPISINTGTFPGTPAV 911

Query: 795  RLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYPDSNMQKPQPVAPGKAEEPNTAS 616
            RL+GDCHFLHRLCQLL FC+ F R Q+PR  G A R  D+NMQKPQ  APGK EE N+ S
Sbjct: 912  RLIGDCHFLHRLCQLLLFCFFFRRTQLPRFIGVAQRSTDTNMQKPQSGAPGKVEEANSVS 971

Query: 615  TRAGPGLVKSEEVQASRAEL----GAKVAEGPKNRAQRLGSGNAGHGYTYEEVKVLFLIL 448
            ++    +V+S+EVQ +R       G  V EGP  R+ RLG GNAG GYT+EEVKVLFLIL
Sbjct: 972  SKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPAGRS-RLGYGNAGQGYTFEEVKVLFLIL 1030

Query: 447  MELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVLQEIVEASLLPYIQNMPRPRGAD 268
            M+LC RT  LAHP P SQVG +NIQ+ LHYI+GNYTVL E+VEASL P++QNMPRPRGAD
Sbjct: 1031 MDLCRRTAALAHPLPVSQVGSSNIQVRLHYINGNYTVLPEVVEASLGPHMQNMPRPRGAD 1090

Query: 267  AAGMLLRELELHPPAEEWHKRNMFGGPWSDTE-CDLLDDTLRPSS-SXXXXXXXXXXXXX 94
            AAG+LLRELELHPP+EEWH+RNMFGGPWSD E     DDT R SS +             
Sbjct: 1091 AAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDITSADDTPRMSSYTDSLDFSSLENCDV 1150

Query: 93   XXGPQGLWPRKRRLSEREAAFGLKTSVGLGA 1
              G  GLWPRKRR+SER+AAFGL TSVGLGA
Sbjct: 1151 YYGVNGLWPRKRRMSERDAAFGLNTSVGLGA 1181


>ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|222848775|gb|EEE86322.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  411 bits (1056), Expect = e-112
 Identities = 213/330 (64%), Positives = 246/330 (74%), Gaps = 6/330 (1%)
 Frame = -2

Query: 972  SGSTSLNESSQVSAWLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPGIPAV 796
            SG TS   S+Q+ AW+QGAIAKI+STTDGVS+   NP+S PS+F PISINTGTFPG PAV
Sbjct: 153  SGGTSSTGSTQMQAWVQGAIAKISSTTDGVSTATPNPISGPSSFMPISINTGTFPGTPAV 212

Query: 795  RLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYP-DSNMQKPQPVAPGKAEEPNTA 619
            RL+GDCHFLHRLCQLL FC+ F R Q+PR  GG  R P D+N QKPQ  A GK EE NT 
Sbjct: 213  RLIGDCHFLHRLCQLLLFCFFFRRTQLPRFAGGTQRNPTDTNAQKPQSGAAGKVEEINTV 272

Query: 618  STRAGPGLVKSEEVQASRAEL---GAK-VAEGPKNRAQRLGSGNAGHGYTYEEVKVLFLI 451
            S++  P +V+S+E QA R      GAK V EGP  R  R+G+GNAG GY++EEV VLFLI
Sbjct: 273  SSKPAPAVVRSDEGQAVRGSQVVPGAKAVEEGPAGR-HRVGNGNAGQGYSFEEVTVLFLI 331

Query: 450  LMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVLQEIVEASLLPYIQNMPRPRGA 271
            LM+LC RT  L HP P SQVG +NIQ+ LHYIDGNYTVL E+VEASL P++QNMPRPRGA
Sbjct: 332  LMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGA 391

Query: 270  DAAGMLLRELELHPPAEEWHKRNMFGGPWSDTECDLLDDTLRPSSSXXXXXXXXXXXXXX 91
            DAAG+LLRELELHPP+EEWH+RNMFGGPWSD E    DDT + +S+              
Sbjct: 392  DAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDIGSDDTSKLNSTNSLDFSSLENCDVY 451

Query: 90   XGPQGLWPRKRRLSEREAAFGLKTSVGLGA 1
             G  GLWPRKRRLSER+AA GL TS GLGA
Sbjct: 452  YGAHGLWPRKRRLSERDAAVGLNTSAGLGA 481


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
            predicted protein [Populus trichocarpa]
          Length = 1328

 Score =  409 bits (1052), Expect = e-112
 Identities = 214/330 (64%), Positives = 244/330 (73%), Gaps = 6/330 (1%)
 Frame = -2

Query: 972  SGSTSLNESSQVSAWLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPGIPAV 796
            SG TS   S+Q+ AW+QGAIAKI+STTDGVS+   NP+S PS+F PISINTGTFPG PAV
Sbjct: 926  SGGTSSTGSTQMQAWVQGAIAKISSTTDGVSTATPNPISGPSSFMPISINTGTFPGTPAV 985

Query: 795  RLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYP-DSNMQKPQPVAPGKAEEPNTA 619
            RL+GDCHFLHRLCQLL FC+ F R Q+PR  GG  R P D+N QKPQ  A GK EE NT 
Sbjct: 986  RLIGDCHFLHRLCQLLLFCFFFRRTQLPRFAGGTQRNPTDTNAQKPQSGAAGKVEEINTV 1045

Query: 618  STRAGPGLVKSEEVQASRAEL---GAK-VAEGPKNRAQRLGSGNAGHGYTYEEVKVLFLI 451
            S++  P  V+S+E QA R      GAK V EGP  R  R+GSGNAG GY+ EEV VLFLI
Sbjct: 1046 SSKPAPAAVRSDEGQAVRGSQVVPGAKAVEEGPAGR-HRVGSGNAGQGYSSEEVTVLFLI 1104

Query: 450  LMELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVLQEIVEASLLPYIQNMPRPRGA 271
            LM+LC RT  L HP P SQVG +NIQ+ LHYIDGNYTVL E+VEASL P++QNMPRPRGA
Sbjct: 1105 LMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGA 1164

Query: 270  DAAGMLLRELELHPPAEEWHKRNMFGGPWSDTECDLLDDTLRPSSSXXXXXXXXXXXXXX 91
            DAAG+LLRELELHPP+EEWH+RNMFGGPWSD E    DDT + +S+              
Sbjct: 1165 DAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDMGSDDTSKLNSTNSLDFSSLENCDVY 1224

Query: 90   XGPQGLWPRKRRLSEREAAFGLKTSVGLGA 1
             G  GLWPRKRRLSER+AA GL TS GLGA
Sbjct: 1225 YGAHGLWPRKRRLSERDAAVGLNTSAGLGA 1254


>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
            vinifera]
          Length = 785

 Score =  402 bits (1034), Expect = e-110
 Identities = 212/331 (64%), Positives = 246/331 (74%), Gaps = 7/331 (2%)
 Frame = -2

Query: 972  SGSTSLNESSQVSAWLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPGIPAV 796
            SG+TS   S+Q+ AW+QGAIAKI+STTDGV +   NP++ P +F PISINTGTFPG PAV
Sbjct: 383  SGTTSSTGSTQMQAWVQGAIAKISSTTDGVPNSTPNPINGPPSFIPISINTGTFPGTPAV 442

Query: 795  RLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYPDSNMQKPQPVAPGKAEEPNTAS 616
            RL+GDCHFLHRLCQLL FC+ F R Q+PR  G A R  D+NM KPQ     K EE +T S
Sbjct: 443  RLIGDCHFLHRLCQLLLFCFFFRRTQLPRVIGVAQRNADTNMHKPQATGTSKVEENSTVS 502

Query: 615  TRAGPGLVKSEEVQASRAEL---GAKVAE-GPKNRAQRLGSGNAGHGYTYEEVKVLFLIL 448
             +    + +SEE Q +RA     GAK AE GP  R+ RLGSGNAG GYT+EEVKVLFLIL
Sbjct: 503  NKLASAMARSEEGQVARANHAINGAKGAEEGPTGRS-RLGSGNAGQGYTFEEVKVLFLIL 561

Query: 447  MELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVLQEIVEASLLPYIQNMPRPRGAD 268
            M+LC RT  L HP P SQVG NNIQ+ LHYIDG+YTVL E+VEASL P++QNMPRPRGAD
Sbjct: 562  MDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVLPEVVEASLGPHMQNMPRPRGAD 621

Query: 267  AAGMLLRELELHPPAEEWHKRNMFGGPWSDTE-CDLLDDTLRPSS-SXXXXXXXXXXXXX 94
            AAG+LLRELELHPPAEEWH+RNMFGGPWSD E    +DDT + S+ +             
Sbjct: 622  AAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFENNDT 681

Query: 93   XXGPQGLWPRKRRLSEREAAFGLKTSVGLGA 1
              G +GLWPRKRRLSER+AAFGL TSVGLGA
Sbjct: 682  YYGARGLWPRKRRLSERDAAFGLNTSVGLGA 712


>emb|CBI41050.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score =  402 bits (1034), Expect = e-110
 Identities = 212/331 (64%), Positives = 246/331 (74%), Gaps = 7/331 (2%)
 Frame = -2

Query: 972  SGSTSLNESSQVSAWLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPGIPAV 796
            SG+TS   S+Q+ AW+QGAIAKI+STTDGV +   NP++ P +F PISINTGTFPG PAV
Sbjct: 390  SGTTSSTGSTQMQAWVQGAIAKISSTTDGVPNSTPNPINGPPSFIPISINTGTFPGTPAV 449

Query: 795  RLVGDCHFLHRLCQLLYFCYIFWRRQMPRHTGGAHRYPDSNMQKPQPVAPGKAEEPNTAS 616
            RL+GDCHFLHRLCQLL FC+ F R Q+PR  G A R  D+NM KPQ     K EE +T S
Sbjct: 450  RLIGDCHFLHRLCQLLLFCFFFRRTQLPRVIGVAQRNADTNMHKPQATGTSKVEENSTVS 509

Query: 615  TRAGPGLVKSEEVQASRAEL---GAKVAE-GPKNRAQRLGSGNAGHGYTYEEVKVLFLIL 448
             +    + +SEE Q +RA     GAK AE GP  R+ RLGSGNAG GYT+EEVKVLFLIL
Sbjct: 510  NKLASAMARSEEGQVARANHAINGAKGAEEGPTGRS-RLGSGNAGQGYTFEEVKVLFLIL 568

Query: 447  MELCTRTTGLAHPFPASQVGGNNIQIHLHYIDGNYTVLQEIVEASLLPYIQNMPRPRGAD 268
            M+LC RT  L HP P SQVG NNIQ+ LHYIDG+YTVL E+VEASL P++QNMPRPRGAD
Sbjct: 569  MDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVLPEVVEASLGPHMQNMPRPRGAD 628

Query: 267  AAGMLLRELELHPPAEEWHKRNMFGGPWSDTE-CDLLDDTLRPSS-SXXXXXXXXXXXXX 94
            AAG+LLRELELHPPAEEWH+RNMFGGPWSD E    +DDT + S+ +             
Sbjct: 629  AAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFENNDT 688

Query: 93   XXGPQGLWPRKRRLSEREAAFGLKTSVGLGA 1
              G +GLWPRKRRLSER+AAFGL TSVGLGA
Sbjct: 689  YYGARGLWPRKRRLSERDAAFGLNTSVGLGA 719


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