BLASTX nr result

ID: Coptis23_contig00025315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025315
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   120   2e-25
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
gb|ACX85638.1| putative transposase [Cucumis melo]                    103   4e-20
ref|XP_002334116.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  120 bits (301), Expect = 2e-25
 Identities = 69/169 (40%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
 Frame = -2

Query: 481 MKQTNAETRAANVTLQPDASKENEVAAAKRRKKTDTSDVWSHFTKVEGSVPL--SSTCNY 308
           M    + T  A  T  PD+S   +   +KR+     S+VW HFTKV+   P    +TCNY
Sbjct: 1   MPTPTSSTPTATPTDTPDSSLPPQ-GTSKRKPTKPPSEVWDHFTKVKECDPNYPRATCNY 59

Query: 307 CKTSFKCDSVINGTSSMRSHIASVCKKYPNRMPKDSKQSTLTFKPKE-------EGGHEL 149
           C   + C    N TS+M++H+AS C+K+P R  KD KQ TL+F+ K        + G+ L
Sbjct: 60  CGIDYACHDKRNETSNMKAHLASGCQKHPFRC-KDPKQKTLSFQSKNKEGEGEGDSGYTL 118

Query: 148 VAITFSQESCVEAIAQMIIVDELPFKFVECEGFLNFCRVACPRLHVPSR 2
           +A +F+ E C + +A+MIIVDEL F+FV+ EGF  FC    P+  +PSR
Sbjct: 119 LATSFNVEHCRKMLARMIIVDELAFRFVQGEGFRAFCSPLQPKFFIPSR 167


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  108 bits (269), Expect = 1e-21
 Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
 Frame = -2

Query: 487 SSMKQTNAETRAANVTLQPDASKENEVAAAKRRKKTDT--SDVWSHFTK--VEGSVPLSS 320
           S   +T AE+  A  T      K+ +V  +++R   D   S +W HFTK  V+   P + 
Sbjct: 21  SPTSKTIAESTNAGSTTDTKG-KQPQVLTSRKRNAEDRKKSQIWDHFTKLDVDPKAPRAE 79

Query: 319 TCNYCKTSFKCDSVINGTSSMRSHIASVCKKYPNRMPKDSKQSTLTFKPKEEGGH----- 155
            CNYC   + C +++NGTS+M SH+  VCKK+P     D KQ  L  + K E G      
Sbjct: 80  -CNYCGKHYACHTIVNGTSNMWSHL-KVCKKFP--FVVDKKQKVLVLESKIENGELGEQN 135

Query: 154 --ELVAITFSQESCVEAIAQMIIVDELPFKFVECEGFLNFCRVACPRLHVPSR 2
              L AI ++ + C + +A+M+I+DELPF FVE  GF  F R   PR  +PSR
Sbjct: 136 VGSLKAIGYNYDECRQTLAKMVIIDELPFNFVEGRGFKLFARTMQPRFDIPSR 188


>ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|222857665|gb|EEE95212.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  107 bits (268), Expect = 2e-21
 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 10/163 (6%)
 Frame = -2

Query: 460 TRAANVTLQPDASKENEVAAAKRRKKTDT--SDVWSHFTKVEGSVPLS-STCNYCKTSFK 290
           T    V+   +  K+ +V A+++R   D   S +W HFTK++G    S +  NYC   + 
Sbjct: 29  TSTIAVSTMENKGKQLQVLASRKRNVDDKKKSQIWDHFTKLDGDPTTSRAEYNYCGKDYA 88

Query: 289 CDSVINGTSSMRSHIASVCKKYPNRMPKDSKQSTLTFKPKEEGGH-------ELVAITFS 131
           C ++INGTS+M SH+  VCKK+P  + K  KQ  L  +P + GG         L AI + 
Sbjct: 89  CHTIINGTSNMWSHL-KVCKKFPFVVIK--KQKILVLEPNKVGGELGDRSVGTLKAIGYE 145

Query: 130 QESCVEAIAQMIIVDELPFKFVECEGFLNFCRVACPRLHVPSR 2
            + C +A+ +M+I+DELPF F+E +GF  F R   PR  +PSR
Sbjct: 146 YDECRKALVKMVIIDELPFNFMEGKGFRLFSRTLQPRFDIPSR 188


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  103 bits (256), Expect = 4e-20
 Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 4/136 (2%)
 Frame = -2

Query: 397 KRRKKTDTSDVWSHFTKVEGSVPL--SSTCNYCKTSFKCDSVINGTSSMRSHIASVCKKY 224
           KR+     S VW HF KVEG  P    + C +C  S+ CDS  NGT++++ H+   CK Y
Sbjct: 21  KRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEK-CKMY 79

Query: 223 PNRMPKDSKQSTLTFKPKEEGGHE--LVAITFSQESCVEAIAQMIIVDELPFKFVECEGF 50
            N + +D+ +         EG  E  L+  +F+QE+C + +A+M+I+DELPFKFVE EGF
Sbjct: 80  VNPL-EDNVEG--------EGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGF 130

Query: 49  LNFCRVACPRLHVPSR 2
             FCR   P+  +PSR
Sbjct: 131 HQFCRALNPKFVIPSR 146


>ref|XP_002334116.1| predicted protein [Populus trichocarpa] gi|222869650|gb|EEF06781.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
 Frame = -2

Query: 472 TNAETRAANVTLQPDAS-KENEVAAAKRRKKTDT--SDVWSHFTKVEGSVPLS-STCNYC 305
           TN    +A      D+  K+ +V A+++R   D   S +W HFTK++G      + CNYC
Sbjct: 26  TNPAPASATAGSTTDSKGKQLQVPASRKRNVDDKKKSQIWDHFTKLDGDPTTPRAECNYC 85

Query: 304 KTSFKCDSVINGTSSMRSHIASVCKKYPNRMPKDSKQSTLTFKPKEEGGH-------ELV 146
              + C ++INGTS+M SH+  VCKK+P     D KQ  L  +P + GG         L 
Sbjct: 86  GKDYACHTIINGTSNMWSHL-KVCKKFP--FVVDKKQKILVLEPNKVGGELGDRSVGTLK 142

Query: 145 AITFSQESCVEAIAQMIIVDELPFKFVE 62
           AI +  + C +A+ +M+I+DELPF FVE
Sbjct: 143 AIGYDYDECRKALVKMVIIDELPFNFVE 170


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