BLASTX nr result

ID: Coptis23_contig00025277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025277
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...   108   3e-21
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-19
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...   100   8e-19
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-18
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-18

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
            sativus]
          Length = 169

 Score =  108 bits (270), Expect = 3e-21
 Identities = 57/160 (35%), Positives = 85/160 (53%)
 Frame = -3

Query: 1230 FQFEKEDDRRAVLDMGSFHISSKLFVVRPWKLFVEAETRELKMLPLWIIIKGMPMEMWNK 1051
            FQF+  +    +L  G +H+  K  ++R W   +  ET     +P+WI +  +P+E+W  
Sbjct: 8    FQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTD 67

Query: 1050 DGFSQVASAVGIPMFTDQLTENMTRTSYARVCVEVNTKCLYPESIPVVLDQQREYTISFE 871
             G   VASA+G P+  D  T+   R SYAR+CVE+N     P  I V L +  E+ +   
Sbjct: 68   AGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNL-RGEEFIVPVT 126

Query: 870  YNWKPPMCAICEVFGHSDQTCLKGALETKSGKEKVWVKKD 751
            Y WKP  C +C  FGHS  TC K  +E +  K++   K+D
Sbjct: 127  YEWKPRKCNLCHSFGHSQSTCPK-KIEIEDNKKEAVGKED 165


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  100 bits (250), Expect = 6e-19
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
 Frame = -3

Query: 1236 YTFQFEKEDDRRAVLDMGSFHISSKLFVVRPWKLFVEAETRELKMLPLWIIIKGMPMEMW 1057
            + F F+  D    VL+   +H++++  V++ W+  ++    +L  +P+W+ +  +P+E W
Sbjct: 195  FIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYW 254

Query: 1056 NKDGFSQVASAVGIPMFTDQLTENMTRTSYARVCVEVNTKCLYPESIPVVLDQQREYTIS 877
               G S VASAVG+P+  D  T    R SYARVCVE++      +   +        TIS
Sbjct: 255  TIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITIS 314

Query: 876  FEYNWKPPMCAICEVFGHSDQTCLKGALETKSGKEKVWVKKDMKTARMEGETNVQSVLNK 697
             EY W P  C+ C VFGH+   C    ++         +K   +  R  G  N +S  NK
Sbjct: 315  AEYEWIPSKCSNCNVFGHTTALCATNNIDN--------LKVVAEGKRNLGAMNSKSADNK 366

Query: 696  EIASEVQEVHTIQEDDGWQAPSKKHRCRPRQSKSVLHSKV-DCPE 565
                        Q    WQ   K+++       + L SKV +C E
Sbjct: 367  ------------QNQFQWQVVGKRNKGSVSGENAPLASKVGNCNE 399


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  100 bits (249), Expect = 8e-19
 Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
 Frame = -3

Query: 1260 MKPYGETMYTFQFEKEDDRRAVLDMGS---FHISSKLFVVRPWKLFVEAETRELKMLPLW 1090
            +K Y +    F  + E     VL +G    F+  SK F+++PW   +  E +ELK  P+W
Sbjct: 69   VKVYSQGSGVFVLDFESAHGKVLALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPVW 128

Query: 1089 IIIKGMPMEMWNKDGFSQVASAVGIPMFTDQLTENMTRTSYARVCVEVNTKCLYPESIPV 910
            I +  + + +W+ +  S++AS VG P+F D +T +     +ARVCVEV+   + P+S+ +
Sbjct: 129  IKLPNLRLHLWSPEALSKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTI 188

Query: 909  VLDQQREYTISFEYNWKP-PMCAICEVFGHSD 817
              D+   Y    EY W+P   C+ C   GHSD
Sbjct: 189  EDDKGYSYDQKVEYEWQPTSRCSYCLHLGHSD 220


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  100 bits (248), Expect = 1e-18
 Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
 Frame = -3

Query: 1287 RTWGTKRFIMKPYGETMYTFQFEKEDDRRAVLDMGS-FHISSKLFVVRPWKLFVEAETRE 1111
            R +G  +   K  G  ++   FE    +   L  G  F+  SK F+++PW   +  E +E
Sbjct: 64   RKYGNVKVYSK--GSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKE 121

Query: 1110 LKMLPLWIIIKGMPMEMWNKDGFSQVASAVGIPMFTDQLTENMTRTSYARVCVEVNTKCL 931
            LK  P+WI +  + + +W+ +   ++AS VG P+F D +T +     +ARVCVEV+   +
Sbjct: 122  LKSAPIWIKLPNLRLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKM 181

Query: 930  YPESIPVVLDQQREYTISFEYNWKP-PMCAICEVFGHSD 817
             P+S+ +  D+   Y    EY W+P   C+ C   GHSD
Sbjct: 182  LPDSVTIEDDKGYSYDQKVEYEWQPTSRCSYCLHLGHSD 220


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
            predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  100 bits (248), Expect = 1e-18
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
 Frame = -3

Query: 1236 YTFQFEKEDDRRAVLDMGSFHISSKLFVVRPWKLFVEAETRELKMLPLWIIIKGMPMEMW 1057
            + F F+  D    VL+   +H++++  V++ W+  ++    +L  +P+W+ +  +P+E W
Sbjct: 195  FIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYW 254

Query: 1056 NKDGFSQVASAVGIPMFTDQLTENMTRTSYARVCVEVNTKCLYPESIPVVLDQQREYTIS 877
               G S VASAVG+P+  D  T    R SYARVCVE++      +   +        TIS
Sbjct: 255  TIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITIS 314

Query: 876  FEYNWKPPMCAICEVFGHSDQTCLKGALETKSGKEKVWVKKDMKTARMEGETNVQSVLNK 697
             EY W P  C+ C VFGH+   C    ++         +K   +  R  G  N +S  NK
Sbjct: 315  AEYEWIPSKCSNCNVFGHTTALCATNNIDN--------LKVVAEGKRNLGAMNSKSADNK 366

Query: 696  EIASEVQEVHTIQEDDGWQAPSKKHRCRPRQSKSVLHSKV-DCPE 565
                        Q    WQ   K+++       + L SKV +C E
Sbjct: 367  ------------QNQFQWQVVGKRNKGSVSGENAPLASKVGNCNE 399



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 55/181 (30%), Positives = 89/181 (49%)
 Frame = -3

Query: 1236 YTFQFEKEDDRRAVLDMGSFHISSKLFVVRPWKLFVEAETRELKMLPLWIIIKGMPMEMW 1057
            + F F+  D    VL+   +H++++  V++ W+  ++    +L  +P+W+ +  +P+E W
Sbjct: 988  FIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYW 1047

Query: 1056 NKDGFSQVASAVGIPMFTDQLTENMTRTSYARVCVEVNTKCLYPESIPVVLDQQREYTIS 877
               G S VASAVG+P+  D  T    R SYARVCVE++      +   +        TIS
Sbjct: 1048 TIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITIS 1107

Query: 876  FEYNWKPPMCAICEVFGHSDQTCLKGALETKSGKEKVWVKKDMKTARMEGETNVQSVLNK 697
             EY W P  C+ C VFGH+   C    ++         +K   +  R  G  N +S  NK
Sbjct: 1108 AEYEWIPSKCSNCNVFGHTTALCATNNIDN--------LKVVAEGKRNLGAMNSKSADNK 1159

Query: 696  E 694
            +
Sbjct: 1160 Q 1160


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