BLASTX nr result

ID: Coptis23_contig00025254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025254
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21966.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002276422.1| PREDICTED: ABC transporter G family member 1...   169   2e-40
emb|CAN60804.1| hypothetical protein VITISV_020682 [Vitis vinifera]   169   2e-40
ref|XP_002317467.1| white-brown-complex ABC transporter family [...   166   2e-39
ref|XP_002330739.1| white-brown-complex ABC transporter family [...   162   3e-38

>emb|CBI21966.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  169 bits (428), Expect = 2e-40
 Identities = 91/135 (67%), Positives = 99/135 (73%)
 Frame = -2

Query: 406 LYGGSNEAMVRVKQLLKELGLEHIGGKXXXXXXXXXXXXXXGEKRRVSIGVDLVHDPPIL 227
           L GG + A  RVK+LLKEL LEH+ G                EKRR+SIGVDLVHDP +L
Sbjct: 137 LRGGRDRAAARVKELLKELELEHVAGARIGDESSRGISGG--EKRRLSIGVDLVHDPTVL 194

Query: 226 LIDEPTSGLDSASALHVVSMLKTMVANQGKTIVLTIHQPGFRILELIDHFVLLSNGTVCH 47
           LIDEPTSGLDSASA HVV +LK+M  NQGKTIVLTIHQPGFRIL+L D  VLLSNGTV H
Sbjct: 195 LIDEPTSGLDSASAHHVVLLLKSMATNQGKTIVLTIHQPGFRILDLFDQVVLLSNGTVLH 254

Query: 46  HGSLHLLEERLMDAG 2
           HG LHLLE RL  AG
Sbjct: 255 HGPLHLLEHRLKIAG 269


>ref|XP_002276422.1| PREDICTED: ABC transporter G family member 10 [Vitis vinifera]
          Length = 608

 Score =  169 bits (428), Expect = 2e-40
 Identities = 91/135 (67%), Positives = 99/135 (73%)
 Frame = -2

Query: 406 LYGGSNEAMVRVKQLLKELGLEHIGGKXXXXXXXXXXXXXXGEKRRVSIGVDLVHDPPIL 227
           L GG + A  RVK+LLKEL LEH+ G                EKRR+SIGVDLVHDP +L
Sbjct: 137 LRGGRDRAAARVKELLKELELEHVAGARIGDESSRGISGG--EKRRLSIGVDLVHDPTVL 194

Query: 226 LIDEPTSGLDSASALHVVSMLKTMVANQGKTIVLTIHQPGFRILELIDHFVLLSNGTVCH 47
           LIDEPTSGLDSASA HVV +LK+M  NQGKTIVLTIHQPGFRIL+L D  VLLSNGTV H
Sbjct: 195 LIDEPTSGLDSASAHHVVLLLKSMATNQGKTIVLTIHQPGFRILDLFDQVVLLSNGTVLH 254

Query: 46  HGSLHLLEERLMDAG 2
           HG LHLLE RL  AG
Sbjct: 255 HGPLHLLEHRLKIAG 269


>emb|CAN60804.1| hypothetical protein VITISV_020682 [Vitis vinifera]
          Length = 665

 Score =  169 bits (428), Expect = 2e-40
 Identities = 91/135 (67%), Positives = 99/135 (73%)
 Frame = -2

Query: 406 LYGGSNEAMVRVKQLLKELGLEHIGGKXXXXXXXXXXXXXXGEKRRVSIGVDLVHDPPIL 227
           L GG + A  RVK+LLKEL LEH+ G                EKRR+SIGVDLVHDP +L
Sbjct: 194 LRGGRDRAAARVKELLKELELEHVAGARIGDESSRGISGG--EKRRLSIGVDLVHDPTVL 251

Query: 226 LIDEPTSGLDSASALHVVSMLKTMVANQGKTIVLTIHQPGFRILELIDHFVLLSNGTVCH 47
           LIDEPTSGLDSASA HVV +LK+M  NQGKTIVLTIHQPGFRIL+L D  VLLSNGTV H
Sbjct: 252 LIDEPTSGLDSASAHHVVLLLKSMATNQGKTIVLTIHQPGFRILDLFDQVVLLSNGTVLH 311

Query: 46  HGSLHLLEERLMDAG 2
           HG LHLLE RL  AG
Sbjct: 312 HGPLHLLEHRLKIAG 326


>ref|XP_002317467.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222860532|gb|EEE98079.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 598

 Score =  166 bits (420), Expect = 2e-39
 Identities = 90/135 (66%), Positives = 99/135 (73%)
 Frame = -2

Query: 406 LYGGSNEAMVRVKQLLKELGLEHIGGKXXXXXXXXXXXXXXGEKRRVSIGVDLVHDPPIL 227
           L GG  EA  RV++LLKELGLEHI                  E+RRVSIGVDLVHDP ++
Sbjct: 138 LPGGKKEAANRVRRLLKELGLEHIADSRIGEGSNWGISGG--ERRRVSIGVDLVHDPAVV 195

Query: 226 LIDEPTSGLDSASALHVVSMLKTMVANQGKTIVLTIHQPGFRILELIDHFVLLSNGTVCH 47
            IDEPTSGLDSASALHV ++LK+MV NQGKTIVLTIHQPGFRILEL D FVLLSNG   H
Sbjct: 196 FIDEPTSGLDSASALHVSTLLKSMVVNQGKTIVLTIHQPGFRILELFDRFVLLSNGYAVH 255

Query: 46  HGSLHLLEERLMDAG 2
            GSLH LEERL  +G
Sbjct: 256 DGSLHSLEERLKFSG 270


>ref|XP_002330739.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222872515|gb|EEF09646.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 558

 Score =  162 bits (410), Expect = 3e-38
 Identities = 87/135 (64%), Positives = 97/135 (71%)
 Frame = -2

Query: 406 LYGGSNEAMVRVKQLLKELGLEHIGGKXXXXXXXXXXXXXXGEKRRVSIGVDLVHDPPIL 227
           L GG  EA  RV++LLKELGLEH+                  E+RRVSIGVDLVHDP ++
Sbjct: 138 LPGGRKEAASRVRRLLKELGLEHVSDSRIGEGSDWGISGG--ERRRVSIGVDLVHDPAVV 195

Query: 226 LIDEPTSGLDSASALHVVSMLKTMVANQGKTIVLTIHQPGFRILELIDHFVLLSNGTVCH 47
            IDEPTSGLDSASALHV ++LK+MV NQGKTIVLTIHQP FRILEL D  VLLSNG   H
Sbjct: 196 FIDEPTSGLDSASALHVATLLKSMVLNQGKTIVLTIHQPSFRILELFDRLVLLSNGYAVH 255

Query: 46  HGSLHLLEERLMDAG 2
            GSLH LEERL  +G
Sbjct: 256 DGSLHFLEERLRFSG 270


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