BLASTX nr result

ID: Coptis23_contig00025250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025250
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187199.2| cell cycle checkpoint control-like protein [Ara...   162   3e-38
emb|CAD29645.1| putative auxin response factor 75 [Arabidopsis t...   162   3e-38
ref|NP_001189815.1| cell cycle checkpoint control-like protein [...   162   3e-38
ref|XP_002882417.1| cell cycle checkpoint control protein family...   162   3e-38
ref|XP_002319522.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38

>ref|NP_187199.2| cell cycle checkpoint control-like protein [Arabidopsis thaliana]
           gi|115646872|gb|ABJ17148.1| At3g05480 [Arabidopsis
           thaliana] gi|332640724|gb|AEE74245.1| cell cycle
           checkpoint control-like protein [Arabidopsis thaliana]
          Length = 439

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 84/97 (86%)
 Frame = +2

Query: 2   WIDPTEEFLQYTHTGDPGDVTFTVKELKAFLSFCEGCEVDIHLYFEKAGEPILMTPKFGL 181
           WIDP+EEFLQYTH GDP D+TF++KELKAFL+FCEGCE DIHL+FEKAGEPILM PKFGL
Sbjct: 206 WIDPSEEFLQYTHAGDPVDITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGL 265

Query: 182 DDGTNSDFDETLVLATMLVSQLQEGIPLEHPVAGAPT 292
            DG++S FD TLVLATMLVSQLQEGIP E P A   T
Sbjct: 266 GDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANST 302


>emb|CAD29645.1| putative auxin response factor 75 [Arabidopsis thaliana]
          Length = 439

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 84/97 (86%)
 Frame = +2

Query: 2   WIDPTEEFLQYTHTGDPGDVTFTVKELKAFLSFCEGCEVDIHLYFEKAGEPILMTPKFGL 181
           WIDP+EEFLQYTH GDP D+TF++KELKAFL+FCEGCE DIHL+FEKAGEPILM PKFGL
Sbjct: 206 WIDPSEEFLQYTHAGDPVDITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGL 265

Query: 182 DDGTNSDFDETLVLATMLVSQLQEGIPLEHPVAGAPT 292
            DG++S FD TLVLATMLVSQLQEGIP E P A   T
Sbjct: 266 GDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANST 302


>ref|NP_001189815.1| cell cycle checkpoint control-like protein [Arabidopsis thaliana]
           gi|332640726|gb|AEE74247.1| cell cycle checkpoint
           control-like protein [Arabidopsis thaliana]
          Length = 456

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 84/97 (86%)
 Frame = +2

Query: 2   WIDPTEEFLQYTHTGDPGDVTFTVKELKAFLSFCEGCEVDIHLYFEKAGEPILMTPKFGL 181
           WIDP+EEFLQYTH GDP D+TF++KELKAFL+FCEGCE DIHL+FEKAGEPILM PKFGL
Sbjct: 223 WIDPSEEFLQYTHAGDPVDITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGL 282

Query: 182 DDGTNSDFDETLVLATMLVSQLQEGIPLEHPVAGAPT 292
            DG++S FD TLVLATMLVSQLQEGIP E P A   T
Sbjct: 283 GDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANST 319


>ref|XP_002882417.1| cell cycle checkpoint control protein family [Arabidopsis lyrata
           subsp. lyrata] gi|297328257|gb|EFH58676.1| cell cycle
           checkpoint control protein family [Arabidopsis lyrata
           subsp. lyrata]
          Length = 438

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 84/97 (86%)
 Frame = +2

Query: 2   WIDPTEEFLQYTHTGDPGDVTFTVKELKAFLSFCEGCEVDIHLYFEKAGEPILMTPKFGL 181
           WIDP+EEFLQYTH GDP D+TF++KELKAFL+FCEGCE DIHL+FEKAGEPILM PKFGL
Sbjct: 206 WIDPSEEFLQYTHAGDPVDITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGL 265

Query: 182 DDGTNSDFDETLVLATMLVSQLQEGIPLEHPVAGAPT 292
            DG++S FD TLVLATMLVSQLQEGIP E P A   T
Sbjct: 266 GDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAANST 302


>ref|XP_002319522.1| predicted protein [Populus trichocarpa] gi|222857898|gb|EEE95445.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/95 (81%), Positives = 83/95 (87%)
 Frame = +2

Query: 2   WIDPTEEFLQYTHTGDPGDVTFTVKELKAFLSFCEGCEVDIHLYFEKAGEPILMTPKFGL 181
           WIDP EEF+QYTH+GDP DVTF VKELKAFLSFCEGCEVDIHLY EKAGEPILM PKFGL
Sbjct: 206 WIDPAEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLYLEKAGEPILMAPKFGL 265

Query: 182 DDGTNSDFDETLVLATMLVSQLQEGIPLEHPVAGA 286
           DDG++S+FD TLVLATML+SQL EG P E P A A
Sbjct: 266 DDGSSSNFDATLVLATMLISQLHEGNPPEPPQATA 300


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