BLASTX nr result

ID: Coptis23_contig00025240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025240
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285184.1| PREDICTED: chromatin modification-related pr...    74   1e-11
ref|XP_002306847.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
gb|AFK47107.1| unknown [Lotus japonicus]                               65   6e-09
gb|AFK37281.1| unknown [Medicago truncatula]                           65   6e-09
ref|XP_002302046.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09

>ref|XP_002285184.1| PREDICTED: chromatin modification-related protein eaf6 [Vitis
           vinifera] gi|296083654|emb|CBI23643.3| unnamed protein
           product [Vitis vinifera]
          Length = 159

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/50 (76%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 458 EEHMVGRDDGRSDF---RMKGGAIPVNGQGKPKKGRTASRDVKRYRPSSE 318
           EE  VGRDDGRSDF   R KGG++P NGQGKPKKGRTA RD KR RPSSE
Sbjct: 96  EELGVGRDDGRSDFGQGRPKGGSLPTNGQGKPKKGRTAPRDGKRIRPSSE 145


>ref|XP_002306847.1| predicted protein [Populus trichocarpa] gi|222856296|gb|EEE93843.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/50 (68%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
 Frame = -1

Query: 458 EEHMVGRDDGRSDF---RMKGGAIPVNGQGKPKKGRTASRDVKRYRPSSE 318
           EE   GRDDGRS+F   R KGG I  NGQGKPKKGR ASRD KR RPS++
Sbjct: 95  EEQAAGRDDGRSEFGVGRSKGGGIYANGQGKPKKGRGASRDSKRIRPSAD 144


>gb|AFK47107.1| unknown [Lotus japonicus]
          Length = 156

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/50 (70%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
 Frame = -1

Query: 458 EEHMVGRDDGRSDF---RMKGGAIPVNGQGKPKKGRTASRDVKRYRPSSE 318
           EE   GRDDGRSDF   R KGG I  NGQGKPKKGR A RD KR R SSE
Sbjct: 95  EELAAGRDDGRSDFGPGRSKGGGIYANGQGKPKKGRGAPRDAKRARASSE 144


>gb|AFK37281.1| unknown [Medicago truncatula]
          Length = 157

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/50 (70%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
 Frame = -1

Query: 458 EEHMVGRDDGRSDF---RMKGGAIPVNGQGKPKKGRTASRDVKRYRPSSE 318
           EE   GRDDGRSDF   R KGG I  NGQGKPKKGR A RD KR R SSE
Sbjct: 95  EELAAGRDDGRSDFGPGRSKGGTIYANGQGKPKKGRGAPRDAKRARASSE 144


>ref|XP_002302046.1| predicted protein [Populus trichocarpa] gi|222843772|gb|EEE81319.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
 Frame = -1

Query: 458 EEHMVGRDDGRSDF---RMKGGAIPVNGQGKPKKGRTASRDVKRYRPSSE 318
           EE   GRD+GRS++   R KGG I  NGQGKPKKGR ASRD KR RPS++
Sbjct: 95  EEQAAGRDEGRSEYGVGRSKGGGIYANGQGKPKKGRGASRDTKRTRPSAD 144


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