BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025216
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   586   e-165
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              586   e-165
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   563   e-158
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   526   e-147
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   519   e-145

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  586 bits (1511), Expect = e-165
 Identities = 297/400 (74%), Positives = 341/400 (85%), Gaps = 2/400 (0%)
 Frame = +1

Query: 1    PQVRDTLRHLKARDMLPAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXXKKFRIHY 180
            PQV DTL HLKARDMLPAIWFIFSRKGCDA+VQY+EDCN              K+FR+ Y
Sbjct: 425  PQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQY 484

Query: 181  PDAVREAGIKGLLQGVAAHHAGCLPLWKSFIEQLFLKGLVKIVFATETLAAGINMPARTA 360
            PDAVRE+ +KGLLQGVAAHHAGCLPLWKSFIE+LF +GLVK+VFATETLAAGINMPARTA
Sbjct: 485  PDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 544

Query: 361  VITSLSKRNETGRIQLRSSELLQMAGRAGRRGTDDSGHVVLIQTPYEGAEEGCKLLFGGI 540
            VI+SLSKR E+GRIQL S+ELLQMAGRAGRRG D+SGH VL+QTPY+GAEE CKLLF G+
Sbjct: 545  VISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAVLVQTPYDGAEECCKLLFAGV 604

Query: 541  EPLVSQFTASYGMVLNLLAGARVTRGLKDKDDSKVSQAGRTLEEARKLVEQSFGNYVGSN 720
            EPLVSQFTASYGMVLNLLAGA+VTR L + +D KV QAGRTLEEARKLVEQSFGNYVGSN
Sbjct: 605  EPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYVGSN 664

Query: 721  VMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQLRAEKRLRTE 900
            VMLAAKEEL++++KEIE L++EV++DA+D+KSRK LSEMAY EI+ LQE+LRAEKRLRTE
Sbjct: 665  VMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRLRTE 724

Query: 901  LRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDSLYGSKVKS 1080
            LRR+MEL RM++L+ LLKE E+GHLPF CLQYKDSE VQHLV AVYLGKVDS  GSKVK+
Sbjct: 725  LRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSKVKN 784

Query: 1081 MIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSDN 1194
            M+  +D F L  +  E +  D     + KPSY++ALGSDN
Sbjct: 785  MVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDN 824


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  586 bits (1511), Expect = e-165
 Identities = 297/400 (74%), Positives = 341/400 (85%), Gaps = 2/400 (0%)
 Frame = +1

Query: 1    PQVRDTLRHLKARDMLPAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXXKKFRIHY 180
            PQV DTL HLKARDMLPAIWFIFSRKGCDA+VQY+EDCN              K+FR+ Y
Sbjct: 315  PQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQY 374

Query: 181  PDAVREAGIKGLLQGVAAHHAGCLPLWKSFIEQLFLKGLVKIVFATETLAAGINMPARTA 360
            PDAVRE+ +KGLLQGVAAHHAGCLPLWKSFIE+LF +GLVK+VFATETLAAGINMPARTA
Sbjct: 375  PDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 434

Query: 361  VITSLSKRNETGRIQLRSSELLQMAGRAGRRGTDDSGHVVLIQTPYEGAEEGCKLLFGGI 540
            VI+SLSKR E+GRIQL S+ELLQMAGRAGRRG D+SGH VL+QTPY+GAEE CKLLF G+
Sbjct: 435  VISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAVLVQTPYDGAEECCKLLFAGV 494

Query: 541  EPLVSQFTASYGMVLNLLAGARVTRGLKDKDDSKVSQAGRTLEEARKLVEQSFGNYVGSN 720
            EPLVSQFTASYGMVLNLLAGA+VTR L + +D KV QAGRTLEEARKLVEQSFGNYVGSN
Sbjct: 495  EPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYVGSN 554

Query: 721  VMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQLRAEKRLRTE 900
            VMLAAKEEL++++KEIE L++EV++DA+D+KSRK LSEMAY EI+ LQE+LRAEKRLRTE
Sbjct: 555  VMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRLRTE 614

Query: 901  LRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDSLYGSKVKS 1080
            LRR+MEL RM++L+ LLKE E+GHLPF CLQYKDSE VQHLV AVYLGKVDS  GSKVK+
Sbjct: 615  LRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSKVKN 674

Query: 1081 MIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSDN 1194
            M+  +D F L  +  E +  D     + KPSY++ALGSDN
Sbjct: 675  MVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDN 714


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  563 bits (1450), Expect = e-158
 Identities = 287/400 (71%), Positives = 337/400 (84%), Gaps = 2/400 (0%)
 Frame = +1

Query: 1    PQVRDTLRHLKARDMLPAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXXKKFRIHY 180
            PQ+ DTL HLKARDMLPA+WFIFSRKGCDAAVQY+EDC               K+FRI Y
Sbjct: 411  PQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQY 470

Query: 181  PDAVREAGIKGLLQGVAAHHAGCLPLWKSFIEQLFLKGLVKIVFATETLAAGINMPARTA 360
            PDAVR + +KGL +GVAAHHAGCLPLWKSFIE+LF +GLVK+VFATETLAAGINMPARTA
Sbjct: 471  PDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA 530

Query: 361  VITSLSKRNETGRIQLRSSELLQMAGRAGRRGTDDSGHVVLIQTPYEGAEEGCKLLFGGI 540
            VI+SLSKR ++G +QL S+ELLQMAGRAGRRG D+ GHVVL+QTPYEG EE CK+LF G+
Sbjct: 531  VISSLSKRGDSGLVQLSSNELLQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGL 590

Query: 541  EPLVSQFTASYGMVLNLLAGARVTRGLKDKDDSKVSQAGRTLEEARKLVEQSFGNYVGSN 720
            +PLVSQFTASYGMVLNLLAGA+VTR   + D+ KVS+AGRTLEEARKL+EQSFGNYVGSN
Sbjct: 591  QPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQSFGNYVGSN 650

Query: 721  VMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQLRAEKRLRTE 900
            VMLAAKEEL++I+KEIE LT+E+SE+A+D+KS+K L++ AY+EI+ LQE+LRAEKRLRTE
Sbjct: 651  VMLAAKEELARIEKEIETLTSEISEEAIDRKSQKLLAQTAYQEIAELQEELRAEKRLRTE 710

Query: 901  LRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDSLYGSKVKS 1080
            LRRKMELER+ SL+PLLKELEDGHLPF  L Y DS+GVQHLV+AVYLGKVD+L   K+KS
Sbjct: 711  LRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVDTLNIEKLKS 770

Query: 1081 MIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSDN 1194
            M+   D+F L  +   F+ GD     D KPSYH+ALGSDN
Sbjct: 771  MVRDYDAFALKTVVENFEVGDIGGE-DVKPSYHVALGSDN 809


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Glycine max]
          Length = 1162

 Score =  526 bits (1356), Expect = e-147
 Identities = 268/400 (67%), Positives = 324/400 (81%), Gaps = 2/400 (0%)
 Frame = +1

Query: 1    PQVRDTLRHLKARDMLPAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXXKKFRIHY 180
            PQV DTL  L++RDMLPAIWFIFSRKGCDAAVQY+E+C               K+FR  Y
Sbjct: 414  PQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELALKRFRKQY 473

Query: 181  PDAVREAGIKGLLQGVAAHHAGCLPLWKSFIEQLFLKGLVKIVFATETLAAGINMPARTA 360
            PDAVRE+ ++GLL+GVAAHHAGCLPLWK+FIE+LF +GLVK+VFATETLAAGINMPARTA
Sbjct: 474  PDAVRESAVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTA 533

Query: 361  VITSLSKRNETGRIQLRSSELLQMAGRAGRRGTDDSGHVVLIQTPYEGAEEGCKLLFGGI 540
            VI+SLSKR ++GRI L S+ELLQMAGRAGRRG D++GHVVLIQTP EGAEEGCK+LF G+
Sbjct: 534  VISSLSKRGDSGRIPLSSNELLQMAGRAGRRGIDENGHVVLIQTPNEGAEEGCKVLFAGL 593

Query: 541  EPLVSQFTASYGMVLNLLAGARVTRGLKDKDDSKVSQAGRTLEEARKLVEQSFGNYVGSN 720
            EPLVSQFTASYGMVLNLLAG +      + D+ K S  G+TLEEARKLVEQSFGNYV SN
Sbjct: 594  EPLVSQFTASYGMVLNLLAGVKAIHRSNESDNMKPS-TGKTLEEARKLVEQSFGNYVSSN 652

Query: 721  VMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQLRAEKRLRTE 900
            VMLAAKEE+++I+KEIEFL +E++++A+D+KSRK LS   Y+EI+ L E LRAEKR+R+E
Sbjct: 653  VMLAAKEEINKIEKEIEFLMSEITDEAIDRKSRKALSPRQYKEIAELLEDLRAEKRVRSE 712

Query: 901  LRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDSLYGSKVKS 1080
            LR++ E +R+++L+PLL+E E GHLPF CLQY+DSEGV+H + AV+LGKVDSL  SK+K 
Sbjct: 713  LRKQKEAKRISALKPLLEEPESGHLPFLCLQYRDSEGVEHSIPAVFLGKVDSLNASKLKD 772

Query: 1081 MIDVDDSFV--LMEREFDHGDDKEHVDAKPSYHIALGSDN 1194
            MI   DSF   L + E    D +   D KPSYH+ALGSDN
Sbjct: 773  MISSVDSFALNLADAEPSVADSELKDDLKPSYHVALGSDN 812


>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
            gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
            DOB1 [Medicago truncatula]
          Length = 1201

 Score =  519 bits (1337), Expect = e-145
 Identities = 264/398 (66%), Positives = 322/398 (80%)
 Frame = +1

Query: 1    PQVRDTLRHLKARDMLPAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXXKKFRIHY 180
            PQ+ DTL HL++RDMLPA+WFIFSRKGCDAAVQYVEDC               K+FRI Y
Sbjct: 448  PQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVLLALKRFRIQY 507

Query: 181  PDAVREAGIKGLLQGVAAHHAGCLPLWKSFIEQLFLKGLVKIVFATETLAAGINMPARTA 360
            PDAVRE  +KGLLQGVAAHHAGCLPLWK+FIE+LF +GLVK+VFATETLAAGINMPARTA
Sbjct: 508  PDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTA 567

Query: 361  VITSLSKRNETGRIQLRSSELLQMAGRAGRRGTDDSGHVVLIQTPYEGAEEGCKLLFGGI 540
            VI+SLSKR++TGR  L S+ELLQMAGRAGRRG D+SGHVVL+QTP EGAEE CK+LF G+
Sbjct: 568  VISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEECCKVLFSGL 627

Query: 541  EPLVSQFTASYGMVLNLLAGARVTRGLKDKDDSKVSQAGRTLEEARKLVEQSFGNYVGSN 720
            EPLVSQFTASYGMVLNLL G +  R     D+ K S +G+TL+EARKL+EQSFGNYV S+
Sbjct: 628  EPLVSQFTASYGMVLNLLGGGKALRRSNTSDEMKTS-SGKTLDEARKLIEQSFGNYVSSS 686

Query: 721  VMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQLRAEKRLRTE 900
            VMLAAKEEL++I+KEI+ L +E++++A+D+KSRK LS+  Y+EI+ LQE LRAEKR+R E
Sbjct: 687  VMLAAKEELNRIEKEIQLLMSEITDEAIDRKSRKALSQRQYKEIAELQENLRAEKRIRAE 746

Query: 901  LRRKMELERMNSLEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDSLYGSKVKS 1080
            LRR+ E +R+++L+PLL+E E  +LPF CLQY+DS+GVQH + AV+LGKVDSL   K+K+
Sbjct: 747  LRRQKETKRISALKPLLEESE--NLPFLCLQYRDSDGVQHSIPAVFLGKVDSLGALKLKN 804

Query: 1081 MIDVDDSFVLMEREFDHGDDKEHVDAKPSYHIALGSDN 1194
            MI   DSF L   +    D + + D  PSYH+ALGSDN
Sbjct: 805  MIGSVDSFALNSAD---ADSELNEDPVPSYHVALGSDN 839