BLASTX nr result

ID: Coptis23_contig00025180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025180
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631761.1| PREDICTED: transcription initiation factor T...    66   3e-09

>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
           unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
 Frame = +2

Query: 29  EEEDIEKYVVKYLKSKGLRQTEMTYHEE-------QSRNPXXXXXXXXDPDIARHLLSFA 187
           EEE+IEK V+ YLK KG +QTE+ + EE       Q++N         DPDIA+H+LSF+
Sbjct: 2   EEEEIEKAVIAYLKKKGFKQTELAFQEEHHQHQNQQTKNSSSSISSSTDPDIAKHILSFS 61

Query: 188 ESENSP 205
           ESEN P
Sbjct: 62  ESENIP 67


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