BLASTX nr result

ID: Coptis23_contig00025135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025135
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48226.1| unknown [Lotus japonicus]                               64   1e-08
ref|XP_003602152.1| Protein MKS1 [Medicago truncatula] gi|355491...    64   2e-08
ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi...    64   2e-08
ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]      61   1e-07
ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>gb|AFK48226.1| unknown [Lotus japonicus]
          Length = 238

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 3/40 (7%)
 Frame = +1

Query: 166 ETPYDKP---SPRRELQGPRPTPLKVRKDSHKIKKPPIAP 276
           E P D P   SPRRELQGPRPTPL++ KDSHKIKKPP+AP
Sbjct: 2   EFPADIPMGRSPRRELQGPRPTPLRINKDSHKIKKPPLAP 41


>ref|XP_003602152.1| Protein MKS1 [Medicago truncatula] gi|355491200|gb|AES72403.1|
           Protein MKS1 [Medicago truncatula]
          Length = 248

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +1

Query: 160 WPETPYDKPSPRRELQGPRPTPLKVRKDSHKIKKPPIAP 276
           +P+ P  + SPRRELQGPRPTPL++ KDSHKIKKPP+AP
Sbjct: 4   FPDIPTGR-SPRRELQGPRPTPLRIHKDSHKIKKPPLAP 41


>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
           gi|223534513|gb|EEF36212.1| Protein MKS1, putative
           [Ricinus communis]
          Length = 254

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/38 (78%), Positives = 32/38 (84%), Gaps = 3/38 (7%)
 Frame = +1

Query: 172 PYDKP---SPRRELQGPRPTPLKVRKDSHKIKKPPIAP 276
           PYD P   SPR+ELQGPRP  LKVRKDSHKIKKPP+AP
Sbjct: 3   PYDFPVTRSPRKELQGPRPPALKVRKDSHKIKKPPVAP 40


>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
          Length = 218

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +1

Query: 187 SPRRELQGPRPTPLKVRKDSHKIKKPPIAP 276
           SPRREL GPRPTPLKVRKDSHKI+KPP+ P
Sbjct: 11  SPRRELLGPRPTPLKVRKDSHKIRKPPVVP 40


>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +1

Query: 142 TDLKMDWPETPYDKPSPRRELQGPRPTPLKVRKDSHKIKKPPIAP 276
           T   MD  + P  + SPR+ELQGPRP  LK+RKDSHKI+KPP+AP
Sbjct: 28  TGFSMDSSDFPISR-SPRKELQGPRPPALKIRKDSHKIRKPPVAP 71


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