BLASTX nr result
ID: Coptis23_contig00025133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025133
(1401 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like... 581 e-163
emb|CBI39502.3| unnamed protein product [Vitis vinifera] 563 e-158
ref|XP_004144821.1| PREDICTED: ATP-dependent DNA helicase Q-like... 544 e-152
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi... 543 e-152
ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 541 e-151
>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
vinifera]
Length = 893
Score = 581 bits (1498), Expect = e-163
Identities = 306/442 (69%), Positives = 346/442 (78%), Gaps = 6/442 (1%)
Frame = +1
Query: 94 DVGVDWECRVKNLLQNHFGFSCLKSFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALL 273
++G DW RV +LL HFG LKSFQKEAL AWLA++DCLVLAATGSGKSLCFQIPALL
Sbjct: 153 EIGKDWVQRVNSLLHKHFGILSLKSFQKEALSAWLAHQDCLVLAATGSGKSLCFQIPALL 212
Query: 274 TGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGAIYVCPETV 453
TGKVVVVISPLISLMHDQCLKLA HGVSACFLGSGQ D+SVE KAMSG Y IYVCPETV
Sbjct: 213 TGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQPDSSVEQKAMSGMYEIIYVCPETV 272
Query: 454 LRLIKPLQRLAENRGIALFAIDEVHCISKWGHDFRPDYRRLSVLRESFRACNLEFLKFDI 633
LRLIKPLQRLAENRGIALFAIDEVHC+SKWGHDFRPDYRRLSVLRE+F AC+L+FL+FDI
Sbjct: 273 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSACSLKFLEFDI 332
Query: 634 PLMALTATATINVRKDILESLCMSKETKIVLTSFFRPNLRFLVKHSRTSSVKSYEKNFRE 813
P+MALTATATI VR+DIL SLCMSKETKIVLTSFFR NLRF VKHSRTSS SYEK+F E
Sbjct: 333 PIMALTATATICVREDILHSLCMSKETKIVLTSFFRSNLRFSVKHSRTSSPSSYEKDFSE 392
Query: 814 LIEAYSTEKTMGKKEHKTSLYGSDDESDCSRT------SDADEISQSDFKHFEDDCFDGN 975
L++ Y T+ +GKK+ K DD SD S + S+AD +S SD ++ D F N
Sbjct: 393 LMDVY-TKSKVGKKKQKIFSQELDDASDDSTSSADRSLSEADRMSPSDVENNGDGYFGEN 451
Query: 976 DTEGSSINRTGEASCMEKELSVEYLEDELDAFQNVDDFDVASGEFCAYVSTENVDTLKPS 1155
D E +S G A+ ++++SVEYLE+E+D FQ+VDD+DV+ GEF TE+ T S
Sbjct: 452 DDEANSSQENGSAASKQRQMSVEYLENEVDLFQSVDDWDVSCGEFSGQPPTEH--TFGSS 509
Query: 1156 ETVDLQMKXXXXXXXXXXXXXXXXTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSH 1335
ET+D MK TIIYVPTRKETL +AK+LCR GVKAAAYNAKLPKSH
Sbjct: 510 ETLDPSMKLDERLTLLKGPLEQGPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLPKSH 569
Query: 1336 LRRVHKEFHQNDLQVIVATIAF 1401
LRRVHKEFH N LQV+VATIAF
Sbjct: 570 LRRVHKEFHDNALQVVVATIAF 591
>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
Length = 1537
Score = 563 bits (1450), Expect = e-158
Identities = 309/484 (63%), Positives = 350/484 (72%), Gaps = 26/484 (5%)
Frame = +1
Query: 28 QSSMFKYLQSSNASKRIKTTLE--------------------------DVGVDWECRVKN 129
QSS+ ++LQ SKRI+T ++G DW RV +
Sbjct: 84 QSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLPELSALPVCCQQELEIGKDWVQRVNS 143
Query: 130 LLQNHFGFSCLKSFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLI 309
LL HFG LKSFQKEAL AWLA++DCLVLAATGSGKSLCFQIPALLTGKVVVVISPLI
Sbjct: 144 LLHKHFGILSLKSFQKEALSAWLAHQDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLI 203
Query: 310 SLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGAIYVCPETVLRLIKPLQRLAE 489
SLMHDQCLKLA HGVSACFLGSGQ D+SVE KAMSG Y IYVCPETVLRLIKPLQRLAE
Sbjct: 204 SLMHDQCLKLAKHGVSACFLGSGQPDSSVEQKAMSGMYEIIYVCPETVLRLIKPLQRLAE 263
Query: 490 NRGIALFAIDEVHCISKWGHDFRPDYRRLSVLRESFRACNLEFLKFDIPLMALTATATIN 669
NRGIALFAIDEVHC+SKWGHDFRPDYRRLSVLRE+F AC+L+FL+FDIP+MALTATATI
Sbjct: 264 NRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSACSLKFLEFDIPIMALTATATIC 323
Query: 670 VRKDILESLCMSKETKIVLTSFFRPNLRFLVKHSRTSSVKSYEKNFRELIEAYSTEKTMG 849
VR+DIL SLCMSKETKIVLTSFFR NLRF VKHSRTSS SYEK+F EL++ Y T+ +G
Sbjct: 324 VREDILHSLCMSKETKIVLTSFFRSNLRFSVKHSRTSSPSSYEKDFSELMDVY-TKSKVG 382
Query: 850 KKEHKTSLYGSDDESDCSRTSDADEISQSDFKHFEDDCFDGNDTEGSSINRTGEASCMEK 1029
KK+ K DD SD D S +D E D +D E + A+ ++
Sbjct: 383 KKKQKIFSQELDDASD-------DSTSSADRSLSEADRMSPSDVENN-------AASKQR 428
Query: 1030 ELSVEYLEDELDAFQNVDDFDVASGEFCAYVSTENVDTLKPSETVDLQMKXXXXXXXXXX 1209
++SVEYLE+E+D FQ+VDD+DV+ GEF TE+ T SET+D MK
Sbjct: 429 QMSVEYLENEVDLFQSVDDWDVSCGEFSGQPPTEH--TFGSSETLDPSMKLDERLTLLKG 486
Query: 1210 XXXXXXTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVA 1389
TIIYVPTRKETL +AK+LCR GVKAAAYNAKLPKSHLRRVHKEFH N LQV+VA
Sbjct: 487 PLEQGPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLPKSHLRRVHKEFHDNALQVVVA 546
Query: 1390 TIAF 1401
TIAF
Sbjct: 547 TIAF 550
>ref|XP_004144821.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cucumis
sativus]
Length = 821
Score = 544 bits (1401), Expect = e-152
Identities = 284/463 (61%), Positives = 344/463 (74%), Gaps = 4/463 (0%)
Frame = +1
Query: 25 SQSSMFKYLQSSNASKRIKTTLE-DVGVDWECRVKNLLQNHFGFSCLKSFQKEALEAWLA 201
+Q + LQ+ + S I E D +DWE ++ +L+ HFG+ LK FQKEALEAWL
Sbjct: 56 TQEHQRRVLQNESDSYLIDGPQEPDTLLDWEKKLNRVLKKHFGYPFLKKFQKEALEAWLN 115
Query: 202 NEDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQ 381
++DCLVLAATGSGKS+CFQIPALLTGKVVVVISPLISLMHDQCLKLA HGVSACFLGSGQ
Sbjct: 116 HQDCLVLAATGSGKSICFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQ 175
Query: 382 TDNSVEHKAMSGAYGAIYVCPETVLRLIKPLQRLAENRGIALFAIDEVHCISKWGHDFRP 561
D+SVE KAM GAY IYVCPETVLRLI+PLQ+LAE RGIALFAIDEVHC+SKWGHDFRP
Sbjct: 176 PDSSVEKKAMGGAYSIIYVCPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRP 235
Query: 562 DYRRLSVLRESFRACNLEFLKFDIPLMALTATATINVRKDILESLCMSKETKIVLTSFFR 741
DYRRLS+LRE+F + L FLK+++PLMALTATAT+ VR+DIL+SLCMSKETKI+LTSFFR
Sbjct: 236 DYRRLSILRENFSSSTLNFLKYNVPLMALTATATVQVREDILKSLCMSKETKIILTSFFR 295
Query: 742 PNLRFLVKHSRTSSVKSYEKNFRELIEAYSTEKTMGKKEHKTSLYGSDDESDCSRTS--- 912
PNLRF VKHSRTSS SY K+F LI+ Y+ + G K+ + D DCS
Sbjct: 296 PNLRFSVKHSRTSSPSSYRKDFSNLIDVYAGNRRFGNKKQTIISHKPDSVLDCSTDCGLY 355
Query: 913 DADEISQSDFKHFEDDCFDGNDTEGSSINRTGEASCMEKELSVEYLEDELDAFQNVDDFD 1092
+ D+IS +D + +D D +D SS S E+ +SVEYLE+E+D FQ+VDD+D
Sbjct: 356 EVDKISPNDLEDTDDSDSDKDDEVDSSEECLPSPS-KERTMSVEYLENEVDVFQSVDDWD 414
Query: 1093 VASGEFCAYVSTENVDTLKPSETVDLQMKXXXXXXXXXXXXXXXXTIIYVPTRKETLALA 1272
VA GEFC + E+ D +E ++L K TIIYVPTRKETL+++
Sbjct: 415 VAYGEFCGQLVCEDTDV--DTEKINLLDKADERQKSSQESLDQGPTIIYVPTRKETLSIS 472
Query: 1273 KFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 1401
KFLC+ GVKAAAYNA LPKSHLR VHK+FH+N+++V+VATIAF
Sbjct: 473 KFLCQCGVKAAAYNASLPKSHLRMVHKDFHENNVEVVVATIAF 515
>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi|223548380|gb|EEF49871.1|
DNA helicase, putative [Ricinus communis]
Length = 803
Score = 543 bits (1398), Expect = e-152
Identities = 284/442 (64%), Positives = 327/442 (73%), Gaps = 6/442 (1%)
Frame = +1
Query: 94 DVGVDWECRVKNLLQNHFGFSCLKSFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALL 273
DVG+DWE R LL HFG+ LKSFQKEAL AW+A++DCLVLAATGSGKSLCFQIPALL
Sbjct: 59 DVGLDWESRANGLLHKHFGYLSLKSFQKEALAAWVAHQDCLVLAATGSGKSLCFQIPALL 118
Query: 274 TGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGAIYVCPETV 453
TGKVVVVISPLISLMHDQCLKL+ HG+SACFLGSGQ D++VE KAM G Y IYVCPETV
Sbjct: 119 TGKVVVVISPLISLMHDQCLKLSRHGISACFLGSGQPDSAVEKKAMRGMYDIIYVCPETV 178
Query: 454 LRLIKPLQRLAENRGIALFAIDEVHCISKWGHDFRPDYRRLSVLRESFRACNLEFLKFDI 633
RLIKPLQ LAE+RGIALFAIDEVHC+SKWGHDFRPDYRRLSVLR++F NL FLKFDI
Sbjct: 179 FRLIKPLQGLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRKNFSIGNLPFLKFDI 238
Query: 634 PLMALTATATINVRKDILESLCMSKETKIVLTSFFRPNLRFLVKHSRTSSVKSYEKNFRE 813
PLMALTATATI V++DI++SL MSKE K VLTSFFRPNL+F VKHSRTSS SYEK+FR+
Sbjct: 239 PLMALTATATIQVQEDIIKSLSMSKERKTVLTSFFRPNLQFSVKHSRTSSPSSYEKDFRK 298
Query: 814 LIEAYSTEKTMGKKEHKTSLYGSDDESDCS------RTSDADEISQSDFKHFEDDCFDGN 975
LI+ Y ++ G KT S +DCS S+ D S S ED+C D +
Sbjct: 299 LIDIYVRKRNAGT---KTQRMFSKVVNDCSGNAADQSLSEEDVFSSSGMISTEDECSDVD 355
Query: 976 DTEGSSINRTGEASCMEKELSVEYLEDELDAFQNVDDFDVASGEFCAYVSTENVDTLKPS 1155
D E + G + K LS++YLE+++D FQNVDD+DVA GEFC + D K
Sbjct: 356 DDEVTLTKENGSTASEGKRLSIDYLENDVDIFQNVDDWDVAFGEFCGQSPCNDWDVHKLP 415
Query: 1156 ETVDLQMKXXXXXXXXXXXXXXXXTIIYVPTRKETLALAKFLCRFGVKAAAYNAKLPKSH 1335
+TVD TIIYVPTRKETL +A +LC FG+KAAAYNA LPKSH
Sbjct: 416 KTVDPPCAAEERLKLLQEPLREGPTIIYVPTRKETLRIANYLCDFGLKAAAYNASLPKSH 475
Query: 1336 LRRVHKEFHQNDLQVIVATIAF 1401
LRRVHKEFH+N L+V+VATIAF
Sbjct: 476 LRRVHKEFHENMLEVVVATIAF 497
>ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
SIM-like [Cucumis sativus]
Length = 821
Score = 541 bits (1395), Expect = e-151
Identities = 283/463 (61%), Positives = 344/463 (74%), Gaps = 4/463 (0%)
Frame = +1
Query: 25 SQSSMFKYLQSSNASKRIKTTLE-DVGVDWECRVKNLLQNHFGFSCLKSFQKEALEAWLA 201
+Q + LQ+ + S I E D +DWE ++ +L+ HFG+ LK FQKEALEAWL
Sbjct: 56 TQEHQRRVLQNESDSYLIDGPQEPDTLLDWEKKLNRVLKKHFGYPFLKKFQKEALEAWLN 115
Query: 202 NEDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQ 381
++DCLVLAATGSGKS+CFQIPALLTGKVVVVISPLISLMHDQCLKLA HGVSACFLGSGQ
Sbjct: 116 HQDCLVLAATGSGKSICFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQ 175
Query: 382 TDNSVEHKAMSGAYGAIYVCPETVLRLIKPLQRLAENRGIALFAIDEVHCISKWGHDFRP 561
D+SVE KAM GAY IYVCPETVLRLI+PLQ+LAE RGIALFAIDEVHC+SKWGHDFRP
Sbjct: 176 PDSSVEKKAMGGAYSIIYVCPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRP 235
Query: 562 DYRRLSVLRESFRACNLEFLKFDIPLMALTATATINVRKDILESLCMSKETKIVLTSFFR 741
DYRRLS+LRE+F + L FLK+++PLMALTATAT+ VR+DIL+SLCMSKETKI+LTS FR
Sbjct: 236 DYRRLSILRENFSSSTLNFLKYNVPLMALTATATVQVREDILKSLCMSKETKIILTSXFR 295
Query: 742 PNLRFLVKHSRTSSVKSYEKNFRELIEAYSTEKTMGKKEHKTSLYGSDDESDCSRTS--- 912
PNLRF VKHSRTSS SY K+F +LI+ Y+ + G K+ + D DCS
Sbjct: 296 PNLRFSVKHSRTSSPSSYRKDFSKLIDVYAGNRRFGNKKQTIISHKPDSVLDCSTDCGLY 355
Query: 913 DADEISQSDFKHFEDDCFDGNDTEGSSINRTGEASCMEKELSVEYLEDELDAFQNVDDFD 1092
+ D+IS +D + +D D +D SS S E+ +SVEYLE+E+D FQ+VDD+D
Sbjct: 356 EVDKISPNDLEDTDDSDSDKDDEVDSSEECLPSPS-KERTMSVEYLENEVDVFQSVDDWD 414
Query: 1093 VASGEFCAYVSTENVDTLKPSETVDLQMKXXXXXXXXXXXXXXXXTIIYVPTRKETLALA 1272
VA GEFC + E+ D +E ++L K TIIYVPTRKETL+++
Sbjct: 415 VAYGEFCGQLVCEDTDV--DTEKINLLDKADERQKSSQESLDQGPTIIYVPTRKETLSIS 472
Query: 1273 KFLCRFGVKAAAYNAKLPKSHLRRVHKEFHQNDLQVIVATIAF 1401
KFLC+ GVKAAAYNA LPKSHLR VHK+FH+N+++V+VATIAF
Sbjct: 473 KFLCQCGVKAAAYNASLPKSHLRMVHKDFHENNVEVVVATIAF 515