BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025107
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| un...   136   2e-30
ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea ma...   136   2e-30
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...   134   6e-30
ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [S...   134   8e-30
ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   132   4e-29

>gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| unknown [Zea mays]
           gi|414880673|tpg|DAA57804.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein isoform 1
           [Zea mays] gi|414880674|tpg|DAA57805.1| TPA: putative
           regulator of chromosome condensation (RCC1) family
           protein isoform 2 [Zea mays]
          Length = 416

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/109 (58%), Positives = 80/109 (73%)
 Frame = +2

Query: 20  GSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGSGNTADSYAPCSVMWPPLDED 199
           G KF+ P+Q+ CGAAHT++VA  GY +WAWGRGRSG LG G TADSY PC VMWPPLDE+
Sbjct: 226 GFKFLGPVQIACGAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDEN 285

Query: 200 FQDALEIAGEKARIQDEEPGRLAEIDKKLSLAMEEIQHLRSKLTLTERY 346
           F +  ++ G  +R+ D       E+++KLS A EE+Q LRSKLTL ERY
Sbjct: 286 FHED-QMGGSTSRVNDHTS---TELEQKLSAASEELQFLRSKLTLMERY 330


>ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
           gi|194690372|gb|ACF79270.1| unknown [Zea mays]
           gi|219884485|gb|ACL52617.1| unknown [Zea mays]
           gi|219885259|gb|ACL53004.1| unknown [Zea mays]
           gi|219885461|gb|ACL53105.1| unknown [Zea mays]
           gi|238010394|gb|ACR36232.1| unknown [Zea mays]
           gi|414880676|tpg|DAA57807.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein [Zea mays]
          Length = 556

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/109 (58%), Positives = 80/109 (73%)
 Frame = +2

Query: 20  GSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGSGNTADSYAPCSVMWPPLDED 199
           G KF+ P+Q+ CGAAHT++VA  GY +WAWGRGRSG LG G TADSY PC VMWPPLDE+
Sbjct: 366 GFKFLGPVQIACGAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDEN 425

Query: 200 FQDALEIAGEKARIQDEEPGRLAEIDKKLSLAMEEIQHLRSKLTLTERY 346
           F +  ++ G  +R+ D       E+++KLS A EE+Q LRSKLTL ERY
Sbjct: 426 FHED-QMGGSTSRVNDHTS---TELEQKLSAASEELQFLRSKLTLMERY 470


>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/112 (56%), Positives = 87/112 (77%), Gaps = 2/112 (1%)
 Frame = +2

Query: 17  YGSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGSGNTADSYAPCSVMWPPLDE 196
           YGSKF DP+QV CGAAHT++VA  GY LW+WGRGRSG LG+G T D +AP +V+WPPL E
Sbjct: 370 YGSKFRDPVQVACGAAHTVLVADDGYKLWSWGRGRSGVLGNGKTVDCFAPSTVLWPPLTE 429

Query: 197 DFQ--DALEIAGEKARIQDEEPGRLAEIDKKLSLAMEEIQHLRSKLTLTERY 346
           DF+  ++   +GEK +I++++P  + E++K+LSLA EE++ L SKL+  ERY
Sbjct: 430 DFKELESGTTSGEK-KIENKDPEEVTEMEKRLSLATEEMKLLHSKLSTMERY 480


>ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
           gi|241928250|gb|EES01395.1| hypothetical protein
           SORBIDRAFT_03g033330 [Sorghum bicolor]
          Length = 560

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
 Frame = +2

Query: 20  GSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGSGNTADSYAPCSVMWPPLDED 199
           G +F+ P+Q+ CGAAHT++VA  GY +WAWGRGRSG LG G TADSY PC VMWPPLDE+
Sbjct: 366 GFRFLGPVQISCGAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDEN 425

Query: 200 FQDALE--IAGEKARIQDEEPGRLAEIDKKLSLAMEEIQHLRSKLTLTERY 346
           FQ+  E    G  +R+ D       E+ +KLS A EE+Q LRSKLTL ERY
Sbjct: 426 FQEIHEDQAGGSTSRVNDRTS---TELTQKLSAASEELQFLRSKLTLMERY 473


>ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 564

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/109 (58%), Positives = 76/109 (69%)
 Frame = +2

Query: 20  GSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGSGNTADSYAPCSVMWPPLDED 199
           G KF+ P+QV CGAAHT++VA  GY +WAWGRGRSG LG   T DSY PC VMWPPLDE+
Sbjct: 367 GFKFLGPVQVTCGAAHTVLVAGDGYRMWAWGRGRSGVLGRDQTTDSYTPCVVMWPPLDEN 426

Query: 200 FQDALEIAGEKARIQDEEPGRLAEIDKKLSLAMEEIQHLRSKLTLTERY 346
           FQ+  E  G+ A           E+++KLS A EE+Q LRSKLTL ERY
Sbjct: 427 FQEIHENQGQ-ASTSGVNDRSSTELEQKLSTASEELQFLRSKLTLMERY 474