BLASTX nr result

ID: Coptis23_contig00025095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025095
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   226   2e-57
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   225   3e-57
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   225   3e-57
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      225   3e-57
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   222   3e-56

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
           gi|296089917|emb|CBI39736.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  226 bits (575), Expect = 2e-57
 Identities = 107/133 (80%), Positives = 120/133 (90%), Gaps = 1/133 (0%)
 Frame = +1

Query: 1   LISGSGLKLHVSLCFHSNEQSFNG-KGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLT 177
           LIS SGLKLHV+L FHSN  S +  KGGVSLPLWI+EIG L+ DIYYRDQNGFSN+DYLT
Sbjct: 152 LISESGLKLHVALSFHSNMHSSSRVKGGVSLPLWIVEIGDLNKDIYYRDQNGFSNDDYLT 211

Query: 178 LGVDQIPLFSGRTALQCYEDFMYSFLNKFETLMGSVIEEVSVGLGPSGELRYPAHPPNDG 357
           LGVD++PLF GRTALQCYEDFM+SF+NKFE+ +GSVIEE+SVGLGPSGELRYPAHP  DG
Sbjct: 212 LGVDELPLFCGRTALQCYEDFMFSFINKFESFIGSVIEEISVGLGPSGELRYPAHPFGDG 271

Query: 358 RWKFPGIGEFQCY 396
           RW+FPGIGEFQCY
Sbjct: 272 RWRFPGIGEFQCY 284


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  225 bits (574), Expect = 3e-57
 Identities = 102/132 (77%), Positives = 116/132 (87%)
 Frame = +1

Query: 1   LISGSGLKLHVSLCFHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTL 180
           LIS +GLKLHV+LCFHSN   F GKGG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTL
Sbjct: 115 LISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTL 174

Query: 181 GVDQIPLFSGRTALQCYEDFMYSFLNKFETLMGSVIEEVSVGLGPSGELRYPAHPPNDGR 360
           GVDQ+PLF GRTA+QCYEDFM SF  KFE  +G+VIEE+S+GLGPSGELRYPAHP  DGR
Sbjct: 175 GVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGR 234

Query: 361 WKFPGIGEFQCY 396
           WKFPGIGEFQC+
Sbjct: 235 WKFPGIGEFQCH 246


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName:
           Full=Inactive beta-amylase 4, chloroplastic; AltName:
           Full=Inactive beta-amylase 6; Flags: Precursor
           gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
           thaliana] gi|332009286|gb|AED96669.1| inactive
           beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  225 bits (574), Expect = 3e-57
 Identities = 102/132 (77%), Positives = 116/132 (87%)
 Frame = +1

Query: 1   LISGSGLKLHVSLCFHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTL 180
           LIS +GLKLHV+LCFHSN   F GKGG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTL
Sbjct: 162 LISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTL 221

Query: 181 GVDQIPLFSGRTALQCYEDFMYSFLNKFETLMGSVIEEVSVGLGPSGELRYPAHPPNDGR 360
           GVDQ+PLF GRTA+QCYEDFM SF  KFE  +G+VIEE+S+GLGPSGELRYPAHP  DGR
Sbjct: 222 GVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGR 281

Query: 361 WKFPGIGEFQCY 396
           WKFPGIGEFQC+
Sbjct: 282 WKFPGIGEFQCH 293


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  225 bits (574), Expect = 3e-57
 Identities = 102/132 (77%), Positives = 116/132 (87%)
 Frame = +1

Query: 1   LISGSGLKLHVSLCFHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTL 180
           LIS +GLKLHV+LCFHSN   F GKGG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTL
Sbjct: 129 LISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTL 188

Query: 181 GVDQIPLFSGRTALQCYEDFMYSFLNKFETLMGSVIEEVSVGLGPSGELRYPAHPPNDGR 360
           GVDQ+PLF GRTA+QCYEDFM SF  KFE  +G+VIEE+S+GLGPSGELRYPAHP  DGR
Sbjct: 189 GVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGR 248

Query: 361 WKFPGIGEFQCY 396
           WKFPGIGEFQC+
Sbjct: 249 WKFPGIGEFQCH 260


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  222 bits (565), Expect = 3e-56
 Identities = 101/132 (76%), Positives = 113/132 (85%)
 Frame = +1

Query: 1   LISGSGLKLHVSLCFHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTL 180
           LIS +GLKLHV+LCFHSN   F GKGG+SLPLWI EIG ++ DIYYRD+ G SNNDYLTL
Sbjct: 162 LISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKRGLSNNDYLTL 221

Query: 181 GVDQIPLFSGRTALQCYEDFMYSFLNKFETLMGSVIEEVSVGLGPSGELRYPAHPPNDGR 360
           GVDQ+PLF GRTA+QCYEDFM SF  KFE   G+VIEE+S+GLGPSGELRYPAHP  DGR
Sbjct: 222 GVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYFGNVIEEISIGLGPSGELRYPAHPSGDGR 281

Query: 361 WKFPGIGEFQCY 396
           WKFPGIGEFQC+
Sbjct: 282 WKFPGIGEFQCH 293


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