BLASTX nr result

ID: Coptis23_contig00025056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025056
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...   126   1e-26
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-26
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-25
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   120   1e-24

>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
            predicted protein [Populus trichocarpa]
          Length = 761

 Score =  126 bits (317), Expect = 1e-26
 Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 5/265 (1%)
 Frame = -3

Query: 1259 QPRLGEKNQGLKEGKTIKKSWAEMLGSSAVGKEKLDFVPPMMVDGKPVIHV*SDQFMHEC 1080
            +P+L   N  LK         ++ LG S+V    L F PP M DG+  +    D F   C
Sbjct: 94   RPKLNFLN-ALKGSDVDDNEGSKTLGISSV--RNLHFAPPTMTDGRVTVAPPLDVFEDGC 150

Query: 1079 KTYENLVVGQFVGRRLGCKYVKETLTKTWNIKNFKMNLYGDK-MFTFQFEKEEDRREVLE 903
            + +++ +VG F+G++L    V     + W+       L  D   F F F+  +    VLE
Sbjct: 151  EFWKSTLVGHFMGQKLPYPVVNSIAKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLE 210

Query: 902  IGYIHIASQLFVIRPWKLFIENEMDDLKTLPIWVVVKYMPLVMWNKKGFSKIGSIIRNPL 723
                H+A+   V++ W+  ++   DDL  +P+WV +  +PL  W  KG S + S I  PL
Sbjct: 211  RAPWHMANMPLVLKRWQPNMQFLKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPL 270

Query: 722  FVDKLTESKSRTSYARVCVEIDTKC*YPDGVPIVIDERRKFKVTFEYNWRPARCACCDTF 543
              D  T  + R SYARVCVEID          +         ++ EY W P++C+ C+ F
Sbjct: 271  HADHTTFLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVF 330

Query: 542  GHSEQKCP----KNVKVVSNPRKGI 480
            GH+   C      N+KVV+  ++ +
Sbjct: 331  GHTRTLCATNNINNLKVVAEGKRNL 355


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  125 bits (313), Expect = 3e-26
 Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
 Frame = -3

Query: 1196 AEMLGSSAVGKEKLDFVPPMMVDGKPVIHV*SDQFMHECKTYENLVVGQFVGRRLGCKYV 1017
            ++ LG S+V    L F PP M DG+  +    D F   C+ +++ +VG FVG++L    V
Sbjct: 114  SKTLGISSV--RNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVV 171

Query: 1016 KETLTKTWNIKNFKMNLYGDK-MFTFQFEKEEDRREVLEIGYIHIASQLFVIRPWKLFIE 840
                 + W+       L  D   F F F+  +    VLE    H+A++  V++ W+  ++
Sbjct: 172  NSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQ 231

Query: 839  NEMDDLKTLPIWVVVKYMPLVMWNKKGFSKIGSIIRNPLFVDKLTESKSRTSYARVCVEI 660
               DD   +P+WV +  +PL  W  KG S + S I  PL  D  T  + R SYARVCVEI
Sbjct: 232  FLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEI 291

Query: 659  DTKC*YPDGVPIVIDERRKFKVTFEYNWRPARCACCDTFGHSEQKCP----KNVKVVSNP 492
            D          +         ++ EY W P++C+ C+ FGH+   C      N+KVV+  
Sbjct: 292  DASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEG 351

Query: 491  RKGI 480
            ++ +
Sbjct: 352  KRNL 355


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  124 bits (312), Expect = 5e-26
 Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
 Frame = -3

Query: 1196 AEMLGSSAVGKEKLDFVPPMMVDGKPVIHV*SDQFMHECKTYENLVVGQFVGRRLGCKYV 1017
            ++ LG S+V    L F PP   DG+  +    D F   C+ +++ +VG FVG++L    V
Sbjct: 114  SKTLGISSV--RNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVV 171

Query: 1016 KETLTKTWNIKNFKMNLYGDK-MFTFQFEKEEDRREVLEIGYIHIASQLFVIRPWKLFIE 840
                 + W+       L  D   F F F+  +    VLE    H+A++  V++ W+  ++
Sbjct: 172  NSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQ 231

Query: 839  NEMDDLKTLPIWVVVKYMPLVMWNKKGFSKIGSIIRNPLFVDKLTESKSRTSYARVCVEI 660
               DDL  +P+WV +  +PL  W  KG S + S +  PL  D  T  + R SYARVCVEI
Sbjct: 232  FLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 291

Query: 659  DTKC*YPDGVPIVIDERRKFKVTFEYNWRPARCACCDTFGHSEQKCP----KNVKVVSNP 492
            D          +         ++ EY W P++C+ C+ FGH+   C      N+KVV+  
Sbjct: 292  DASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEG 351

Query: 491  RKGI 480
            ++ +
Sbjct: 352  KRNL 355


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
            predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  123 bits (308), Expect = 1e-25
 Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
 Frame = -3

Query: 1196 AEMLGSSAVGKEKLDFVPPMMVDGKPVIHV*SDQFMHECKTYENLVVGQFVGRRLGCKYV 1017
            ++ LG S+V    + F PP   DG+  +    D F   C+ +++ +VG FVG++L    V
Sbjct: 114  SKTLGISSV--RNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVV 171

Query: 1016 KETLTKTWNIKNFKMNLYGDK-MFTFQFEKEEDRREVLEIGYIHIASQLFVIRPWKLFIE 840
                 + W+       L  D   F F F+  +    VLE    H+A++  V++ W+  ++
Sbjct: 172  NSIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQ 231

Query: 839  NEMDDLKTLPIWVVVKYMPLVMWNKKGFSKIGSIIRNPLFVDKLTESKSRTSYARVCVEI 660
               DDL  +P+WV +  +PL  W  KG S + S +  PL  D  T  + R SYARVCVEI
Sbjct: 232  FLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 291

Query: 659  DTKC*YPDGVPIVIDERRKFKVTFEYNWRPARCACCDTFGHSEQKCP----KNVKVVSNP 492
            D          +         ++ EY W P++C+ C+ FGH+   C      N+KVV+  
Sbjct: 292  DASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEG 351

Query: 491  RKGI 480
            ++ +
Sbjct: 352  KRNL 355



 Score =  123 bits (308), Expect = 1e-25
 Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
 Frame = -3

Query: 1196 AEMLGSSAVGKEKLDFVPPMMVDGKPVIHV*SDQFMHECKTYENLVVGQFVGRRLGCKYV 1017
            ++ LG S+V    + F PP   DG+  +    D F   C+ +++ +VG FVG++L    V
Sbjct: 907  SKTLGISSV--RNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVV 964

Query: 1016 KETLTKTWNIKNFKMNLYGDK-MFTFQFEKEEDRREVLEIGYIHIASQLFVIRPWKLFIE 840
                 + W+       L  D   F F F+  +    VLE    H+A++  V++ W+  ++
Sbjct: 965  NSIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQ 1024

Query: 839  NEMDDLKTLPIWVVVKYMPLVMWNKKGFSKIGSIIRNPLFVDKLTESKSRTSYARVCVEI 660
               DDL  +P+WV +  +PL  W  KG S + S +  PL  D  T  + R SYARVCVEI
Sbjct: 1025 FLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 1084

Query: 659  DTKC*YPDGVPIVIDERRKFKVTFEYNWRPARCACCDTFGHSEQKCP----KNVKVVSNP 492
            D          +         ++ EY W P++C+ C+ FGH+   C      N+KVV+  
Sbjct: 1085 DASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEG 1144

Query: 491  RKGI 480
            ++ +
Sbjct: 1145 KRNL 1148


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  120 bits (300), Expect = 1e-24
 Identities = 85/279 (30%), Positives = 128/279 (45%), Gaps = 12/279 (4%)
 Frame = -3

Query: 1214 TIKKSWAEMLGSSAVGKE--KLDFVPPMMVDGKPVIHV*SDQFMHECKTYENLVVGQFVG 1041
            T +K W ++L ++        ++FV P +++G+  + + ++    E + +EN ++   +G
Sbjct: 64   TDRKLWVDVLNNNRNPSNGVTMEFVAPKLINGEVEVEIEAEDIASELQFWENAMILYVLG 123

Query: 1040 RRLGCKYVKETLTKTWNIKNFKMNLYGDK-MFTFQFEKEEDRREVLEIGYIHIASQLFVI 864
              L    +K  + K WN       LY D   F  +F   EDR  V+  G   I +   ++
Sbjct: 124  GILSMTMLKNYMVKMWNFVILPDMLYHDDGYFLLRFMNREDRETVMMRGPYTIRNMPIIL 183

Query: 863  RPWKLFIENEMDDLKTLPIWVVVKYMPLVMWNKKGFSKIGSIIRNPLFVDKLTESKSRTS 684
            + W        D  KT+PIWV +  +PL +W  K  +KIGS I NPL  D+ T  K R S
Sbjct: 184  KEWTPDFNLSKDLEKTMPIWVKLPQLPLCLWGLKSLNKIGSAIGNPLITDECTAQKLRVS 243

Query: 683  YARVCVEIDTKC*YPDGVPIVIDERRKFKVTFEYNWRPARCACCDTFGHSEQKCPKNVKV 504
            Y R+ VE+D      + + I      K K   EY W+P  C  C   GH   +C K  KV
Sbjct: 244  YVRILVEVDITQKLVEEITISDRTGGKIKQIVEYEWKPEFCEKCQKAGH---QCGKK-KV 299

Query: 503  VSN--PR-------KGIWLKKKDVEHGILDEREGAEKGE 414
            V    PR       K   L K  V++    E EG +K E
Sbjct: 300  VKKWIPRNKQADEVKADPLPKTPVQN---TETEGEDKPE 335


Top