BLASTX nr result

ID: Coptis23_contig00025031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025031
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37172.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244...    62   6e-08
ref|XP_002526559.1| transcription factor, putative [Ricinus comm...    59   5e-07

>emb|CBI37172.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKTEAEVVEKDHD-T 178
           EEQG+ LQM+FE+QCK+  DKLKTS+   E+PSSL+ +     P+ K+E E    +HD T
Sbjct: 297 EEQGRYLQMMFEKQCKSGIDKLKTSSSALENPSSLSSDTIPNSPA-KSEMEASHDEHDKT 355

Query: 179 EHGTVDVQDTANENSSTCTEKQKTLASEVI 268
               V+   T++ N    + +Q  + +E +
Sbjct: 356 GTDLVNDSKTSSGNPQKLSREQNAIETEAL 385


>ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244545 [Vitis vinifera]
          Length = 517

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKTEAEVVEKDHD-T 178
           EEQG+ LQM+FE+QCK+  DKLKTS+   E+PSSL+ +     P+ K+E E    +HD T
Sbjct: 382 EEQGRYLQMMFEKQCKSGIDKLKTSSSALENPSSLSSDTIPNSPA-KSEMEASHDEHDKT 440

Query: 179 EHGTVDVQDTANENSSTCTEKQKTLASEVI 268
               V+   T++ N    + +Q  + +E +
Sbjct: 441 GTDLVNDSKTSSGNPQKLSREQNAIETEAL 470


>ref|XP_002526559.1| transcription factor, putative [Ricinus communis]
           gi|223534120|gb|EEF35837.1| transcription factor,
           putative [Ricinus communis]
          Length = 491

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   EEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKTEAEVVEKDH-DT 178
           EEQG+ LQM+FE+QCK+  D LK S+   E+PSS          S K E E  + DH + 
Sbjct: 380 EEQGRYLQMMFEKQCKSGTDVLKASSSAVENPSSALSSDAVHDSSGKNEMEASKVDHGNA 439

Query: 179 EHGTVDVQDTANENSSTCTEKQKTLASEVIEVFEPDVDE 295
              T D +    E S    EK+K L  E     EPD  E
Sbjct: 440 ITNTDDTKSKLEERSQDPNEKKKALQIEASGNPEPDNGE 478


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