BLASTX nr result

ID: Coptis23_contig00025011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025011
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...    96   4e-18
ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8...    95   5e-18
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...    94   9e-18
ref|XP_002327533.1| multidrug resistance protein ABC transporter...    94   9e-18
ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8...    92   6e-17

>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = +1

Query: 1   LEDIPSLLSEDEALFAYQSFVSAWNLIWKRKSSDNSFNLVFKALAKVHLKEFIVTGIFAF 180
           LED+P L SEDEA  AYQ F  AW  + + +SS ++ NLVF+ALA V+LKE I  G+ A 
Sbjct: 233 LEDVPPLASEDEAELAYQKFSQAWECLQRERSSSSTDNLVFRALAIVYLKEMIFVGLCAL 292

Query: 181 LRTISVVVSPLLVYAIVQYTS 243
           LRTISVVVSPLL+YA V+Y++
Sbjct: 293 LRTISVVVSPLLLYAFVKYST 313


>ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1465

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = +1

Query: 1   LEDIPSLLSEDEALFAYQSFVSAWNLIWKRKSSDNSFNLVFKALAKVHLKEFIVTGIFAF 180
           LEDIPSL+SED A  AYQ F  AW  + K K+ +NS NLV +ALA+V+ KE +  GIFA 
Sbjct: 233 LEDIPSLVSEDGAELAYQKFAHAWEQLQKEKTPNNSCNLVLQALARVYWKETLSAGIFAL 292

Query: 181 LRTISVVVSPLLVYAIVQYTS 243
            +TISVVVSPLL+YA V+Y++
Sbjct: 293 FKTISVVVSPLLLYAFVKYSN 313


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = +1

Query: 1   LEDIPSLLSEDEALFAYQSFVSAWNLIWKRKSSDNSFNLVFKALAKVHLKEFIVTGIFAF 180
           LEDIPSL  EDEA  AY++F  AW L+ + K+S N+ NLV +ALAKV+ KE +   I A 
Sbjct: 233 LEDIPSLTPEDEAELAYKNFAHAWELLQREKNSTNTSNLVLRALAKVYWKETVFVAICAL 292

Query: 181 LRTISVVVSPLLVYAIVQYTS 243
           LRTISVVVSPLL+YA V Y++
Sbjct: 293 LRTISVVVSPLLLYAFVNYSN 313


>ref|XP_002327533.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222836087|gb|EEE74508.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1253

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/81 (58%), Positives = 62/81 (76%)
 Frame = +1

Query: 4   EDIPSLLSEDEALFAYQSFVSAWNLIWKRKSSDNSFNLVFKALAKVHLKEFIVTGIFAFL 183
           EDIPSL+ EDEA  AYQ F SAW+ + + KSS+++ NLV +A+AK+H KE I  GI AFL
Sbjct: 46  EDIPSLVPEDEANAAYQKFASAWDSLVREKSSNSTKNLVLQAVAKIHFKENISVGICAFL 105

Query: 184 RTISVVVSPLLVYAIVQYTSL 246
           RT++VV  PLL+YA V Y++L
Sbjct: 106 RTLAVVALPLLLYAFVNYSNL 126


>ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1469

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/81 (59%), Positives = 59/81 (72%)
 Frame = +1

Query: 1   LEDIPSLLSEDEALFAYQSFVSAWNLIWKRKSSDNSFNLVFKALAKVHLKEFIVTGIFAF 180
           LEDIPSL SED+A FAYQ FV AW+ + + +  +NS NLV  ++A+V+L E I   I AF
Sbjct: 238 LEDIPSLASEDKADFAYQKFVHAWDSLLRERGRNNSRNLVLWSIARVYLNENIFIAICAF 297

Query: 181 LRTISVVVSPLLVYAIVQYTS 243
           LRTI  VVSPLLVYA V Y+S
Sbjct: 298 LRTICAVVSPLLVYAFVNYSS 318


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