BLASTX nr result

ID: Coptis23_contig00025003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025003
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264181.1| PREDICTED: uncharacterized protein LOC100263...   138   2e-38
ref|XP_002308111.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-38
ref|XP_003549295.1| PREDICTED: uncharacterized protein LOC100805...   135   2e-37
gb|ACU18505.1| unknown [Glycine max]                                  135   7e-37
ref|XP_003610047.1| hypothetical protein MTR_4g127350 [Medicago ...   132   9e-37

>ref|XP_002264181.1| PREDICTED: uncharacterized protein LOC100263241 [Vitis vinifera]
           gi|297735472|emb|CBI17912.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score =  138 bits (348), Expect(2) = 2e-38
 Identities = 64/74 (86%), Positives = 70/74 (94%)
 Frame = +1

Query: 262 MKNRPREDQARSTGIAFGPSYQSVSTKGKPSKLHKRKHQIGSLYFDMKQNELELAERRSK 441
           +KNRPREDQ + TGIAFGPSYQ VSTKGKP+KLHKRKHQIGSLYFDMKQ E+EL+ERR+K
Sbjct: 294 IKNRPREDQVKLTGIAFGPSYQPVSTKGKPTKLHKRKHQIGSLYFDMKQKEMELSERRAK 353

Query: 442 GFLTKAETQAKYGW 483
           GFLTKAETQAKYGW
Sbjct: 354 GFLTKAETQAKYGW 367



 Score = 46.2 bits (108), Expect(2) = 2e-38
 Identities = 25/56 (44%), Positives = 34/56 (60%)
 Frame = +2

Query: 5   NYGGYEGSYGDDNGAETVALTTLTQDNSGFIQIPRMLGKRGRSDIPTEIVEVKQDE 172
           NYGGY G Y ++ G  + A           +++P   GKRGR+++P EIVEVKQDE
Sbjct: 241 NYGGY-GHYENNWGDGSAAALPEVAGTESAVRVP---GKRGRNEVPVEIVEVKQDE 292


>ref|XP_002308111.1| predicted protein [Populus trichocarpa] gi|222854087|gb|EEE91634.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  134 bits (337), Expect(2) = 3e-38
 Identities = 62/74 (83%), Positives = 67/74 (90%)
 Frame = +1

Query: 262 MKNRPREDQARSTGIAFGPSYQSVSTKGKPSKLHKRKHQIGSLYFDMKQNELELAERRSK 441
           +KNRPREDQ +STGIAFGP+YQ  S+KGKPSKLHKRKHQIG+LYFDMKQ E EL ERRSK
Sbjct: 131 IKNRPREDQVKSTGIAFGPAYQPASSKGKPSKLHKRKHQIGTLYFDMKQKETELTERRSK 190

Query: 442 GFLTKAETQAKYGW 483
           GFLTKAET AKYGW
Sbjct: 191 GFLTKAETHAKYGW 204



 Score = 50.1 bits (118), Expect(2) = 3e-38
 Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +2

Query: 5   NYGGY--EGSYGDDNGAETVALTTLTQDNSGFIQIPRMLGKRGRSDIPTEIVEVKQDE 172
           +YGGY   G YG +    +VA    T          RM+GKR R++IPTEI+EVKQDE
Sbjct: 72  SYGGYGDSGQYGSNWDDRSVAAVAETGSGGAAESALRMMGKRRRNEIPTEIIEVKQDE 129


>ref|XP_003549295.1| PREDICTED: uncharacterized protein LOC100805518 [Glycine max]
          Length = 372

 Score =  135 bits (340), Expect(2) = 2e-37
 Identities = 62/74 (83%), Positives = 69/74 (93%)
 Frame = +1

Query: 262 MKNRPREDQARSTGIAFGPSYQSVSTKGKPSKLHKRKHQIGSLYFDMKQNELELAERRSK 441
           +KNRPREDQA+ TGIAFGP+YQ  STKGKP+KLHKRKHQIGSLYFDMKQNE++L ERR+K
Sbjct: 299 IKNRPREDQAKLTGIAFGPTYQPASTKGKPTKLHKRKHQIGSLYFDMKQNEMKLTERRAK 358

Query: 442 GFLTKAETQAKYGW 483
           G LTKAETQAKYGW
Sbjct: 359 GMLTKAETQAKYGW 372



 Score = 45.8 bits (107), Expect(2) = 2e-37
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
 Frame = +2

Query: 5   NYGGYEGSYGD-----DNGAETVALTTLTQDNSGFIQIPRMLGKRGRSDIPTEIVEVKQD 169
           NYG    +YGD     +N  +  A T + + +     + R+ GKRGR +IPTE++EVKQ+
Sbjct: 237 NYGDAYAAYGDYGQYGNNWGDVSAATPVPEASGISDSVMRIPGKRGRHEIPTEVIEVKQE 296

Query: 170 E 172
           E
Sbjct: 297 E 297


>gb|ACU18505.1| unknown [Glycine max]
          Length = 372

 Score =  135 bits (340), Expect(2) = 7e-37
 Identities = 62/74 (83%), Positives = 69/74 (93%)
 Frame = +1

Query: 262 MKNRPREDQARSTGIAFGPSYQSVSTKGKPSKLHKRKHQIGSLYFDMKQNELELAERRSK 441
           +KNRPREDQA+ TGIAFGP+YQ  STKGKP+KLHKRKHQIGSLYFDMKQNE++L ERR+K
Sbjct: 299 IKNRPREDQAKLTGIAFGPTYQPASTKGKPTKLHKRKHQIGSLYFDMKQNEMKLTERRAK 358

Query: 442 GFLTKAETQAKYGW 483
           G LTKAETQAKYGW
Sbjct: 359 GMLTKAETQAKYGW 372



 Score = 44.3 bits (103), Expect(2) = 7e-37
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
 Frame = +2

Query: 5   NYGGYEGSYGD-----DNGAETVALTTLTQDNSGFIQIPRMLGKRGRSDIPTEIVEVKQD 169
           NYG    +YGD     +N  +  A T + + +     + R+ GKRGR +IPTE +EVKQ+
Sbjct: 237 NYGDAYAAYGDYGQYGNNWGDVSAATPVPEASGISDSVMRIPGKRGRHEIPTEAIEVKQE 296

Query: 170 E 172
           E
Sbjct: 297 E 297


>ref|XP_003610047.1| hypothetical protein MTR_4g127350 [Medicago truncatula]
           gi|355511102|gb|AES92244.1| hypothetical protein
           MTR_4g127350 [Medicago truncatula]
           gi|388502858|gb|AFK39495.1| unknown [Medicago
           truncatula]
          Length = 377

 Score =  132 bits (333), Expect(2) = 9e-37
 Identities = 62/74 (83%), Positives = 69/74 (93%)
 Frame = +1

Query: 262 MKNRPREDQARSTGIAFGPSYQSVSTKGKPSKLHKRKHQIGSLYFDMKQNELELAERRSK 441
           +KNRPREDQ++ TG+AFGPSYQ VS KGKPSKL KRKHQIGSLYFDMKQNE++LAERR+K
Sbjct: 304 IKNRPREDQSKLTGLAFGPSYQPVSAKGKPSKLLKRKHQIGSLYFDMKQNEMKLAERRAK 363

Query: 442 GFLTKAETQAKYGW 483
           G LTKAETQAKYGW
Sbjct: 364 GMLTKAETQAKYGW 377



 Score = 46.6 bits (109), Expect(2) = 9e-37
 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
 Frame = +2

Query: 2   ANYGG-YE--GSYGDDNGAETVALTTLTQDNSGFIQ-IPRMLGKRGRSDIPTEIVEVKQD 169
           A+YGG YE  G YG++    + A T +  + SG  + + +  GKRGR D+P E++EVKQD
Sbjct: 242 ASYGGAYEDYGQYGNNWVDRSGAATVVQPEPSGISESMLKFTGKRGRKDVPVEVIEVKQD 301

Query: 170 E 172
           E
Sbjct: 302 E 302


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