BLASTX nr result

ID: Coptis23_contig00024947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024947
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...    92   9e-17
gb|AFK38641.1| unknown [Medicago truncatula]                           76   8e-12

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 52/76 (68%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +1

Query: 97  LFLSRVSFRRKGLRIPNPVG-LDGFVCPSLANSIPAQRHCLCAPYRSRSVFATAGKPVVE 273
           LF+S VSFRRKGLRIPNPVG       P+   + P  R+ + APYRSRSVFATAG+ VVE
Sbjct: 196 LFISPVSFRRKGLRIPNPVGGRTALFAPAWLIASP--RNDILAPYRSRSVFATAGEAVVE 253

Query: 274 AKPIATPTIKYEIEPL 321
           AKPIATPTIKYEI PL
Sbjct: 254 AKPIATPTIKYEIGPL 269



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 37/56 (66%), Positives = 39/56 (69%)
 Frame = +1

Query: 544 WPTPPKSAYVIWELMAGNNPYGFDIR*E**EKSPGWLVSLVIGDYLAWFGEHLLGF 711
           WP+PPKSAYVIWELM                +SPGWLVSLVIGDYLAWFGEHLL F
Sbjct: 276 WPSPPKSAYVIWELM---------------NQSPGWLVSLVIGDYLAWFGEHLLVF 316


>gb|AFK38641.1| unknown [Medicago truncatula]
          Length = 57

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 39/46 (84%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 MRRPFLRKETRERKSYAIDRPFRSDFESIGLPFFLILNEAGQIENE 3
           MRRPFLRKET E KSYAIDRPFRSDFESI L FF IL EAG+IENE
Sbjct: 1   MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFFSILFEAGRIENE 46


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