BLASTX nr result
ID: Coptis23_contig00024317
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024317 (289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305167.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 gb|ABK94526.1| unknown [Populus trichocarpa] 80 2e-13 ref|XP_002283938.1| PREDICTED: uncharacterized protein LOC100258... 78 7e-13 ref|XP_002520619.1| conserved hypothetical protein [Ricinus comm... 69 2e-12 ref|XP_004171611.1| PREDICTED: elongator complex protein 5-like ... 74 1e-11 >ref|XP_002305167.1| predicted protein [Populus trichocarpa] gi|222848131|gb|EEE85678.1| predicted protein [Populus trichocarpa] Length = 386 Score = 80.1 bits (196), Expect = 2e-13 Identities = 33/67 (49%), Positives = 50/67 (74%) Frame = -1 Query: 205 LYSCSLQPFIKHLICKKSQSKCLVLIAFDKSPSFYYELLRSKGVDVNTMKNWLRILDCYS 26 ++S L ++ KSQS+ +V++AF +SPSFY +LL+S+G+DVN+ W++ILDCY+ Sbjct: 36 VFSHVLSQLSSFILASKSQSRGIVIVAFSRSPSFYVDLLKSRGIDVNSSHKWVQILDCYT 95 Query: 25 DPLGWKD 5 DPL WKD Sbjct: 96 DPLCWKD 102 >gb|ABK94526.1| unknown [Populus trichocarpa] Length = 379 Score = 80.1 bits (196), Expect = 2e-13 Identities = 33/67 (49%), Positives = 50/67 (74%) Frame = -1 Query: 205 LYSCSLQPFIKHLICKKSQSKCLVLIAFDKSPSFYYELLRSKGVDVNTMKNWLRILDCYS 26 ++S L ++ KSQS+ +V++AF +SPSFY +LL+S+G+DVN+ W++ILDCY+ Sbjct: 36 VFSHVLSQLSSFILASKSQSRGIVIVAFSRSPSFYVDLLKSRGIDVNSSHKWVQILDCYT 95 Query: 25 DPLGWKD 5 DPL WKD Sbjct: 96 DPLCWKD 102 >ref|XP_002283938.1| PREDICTED: uncharacterized protein LOC100258368 [Vitis vinifera] gi|296087267|emb|CBI33641.3| unnamed protein product [Vitis vinifera] Length = 376 Score = 78.2 bits (191), Expect = 7e-13 Identities = 32/67 (47%), Positives = 49/67 (73%) Frame = -1 Query: 205 LYSCSLQPFIKHLICKKSQSKCLVLIAFDKSPSFYYELLRSKGVDVNTMKNWLRILDCYS 26 +++ L +++ KSQSK +VL+AF +SPSFY + L++ G+D+ + K W+ ILDCY+ Sbjct: 36 VFNYVLTKLSSNILAGKSQSKGIVLVAFSRSPSFYVDFLKTNGIDLVSAKKWISILDCYT 95 Query: 25 DPLGWKD 5 DPLGWKD Sbjct: 96 DPLGWKD 102 >ref|XP_002520619.1| conserved hypothetical protein [Ricinus communis] gi|223540180|gb|EEF41755.1| conserved hypothetical protein [Ricinus communis] Length = 376 Score = 68.9 bits (167), Expect(2) = 2e-12 Identities = 27/55 (49%), Positives = 43/55 (78%) Frame = -1 Query: 169 LICKKSQSKCLVLIAFDKSPSFYYELLRSKGVDVNTMKNWLRILDCYSDPLGWKD 5 ++ +KSQ + +V++A+ +SPSFY +LL+ + +DV + W+ ILDCY+DPLGWKD Sbjct: 48 ILAQKSQFQGIVVLAYTRSPSFYVDLLKRRKIDVASSHKWIYILDCYTDPLGWKD 102 Score = 27.7 bits (60), Expect(2) = 2e-12 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -2 Query: 219 YGFQAFTHVLCSLSSNILSAKS 154 +GF F HVL LSS IL+ KS Sbjct: 32 FGFDMFAHVLSRLSSFILAQKS 53 >ref|XP_004171611.1| PREDICTED: elongator complex protein 5-like [Cucumis sativus] Length = 178 Score = 73.9 bits (180), Expect = 1e-11 Identities = 30/65 (46%), Positives = 48/65 (73%) Frame = -1 Query: 202 YSCSLQPFIKHLICKKSQSKCLVLIAFDKSPSFYYELLRSKGVDVNTMKNWLRILDCYSD 23 +S L +++ KSQS+ LVL++F +SP++Y +LL+ +G+DV + W++ILDCY+D Sbjct: 37 FSHVLTQLSSNILAGKSQSRGLVLLSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTD 96 Query: 22 PLGWK 8 PLGWK Sbjct: 97 PLGWK 101