BLASTX nr result

ID: Coptis23_contig00024295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024295
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   142   5e-32
emb|CBI16036.3| unnamed protein product [Vitis vinifera]              142   7e-32
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   142   7e-32
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   138   1e-30
ref|XP_002276084.1| PREDICTED: copper transporter 6 [Vitis vinif...   130   2e-28

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  142 bits (358), Expect = 5e-32
 Identities = 67/111 (60%), Positives = 83/111 (74%)
 Frame = -2

Query: 483 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISHSKFIKKGSSHVSAGLLET 304
           +F+WGK+  ILFSGWPGTSTGMY             VEW+SH + +K GS++V+AGL++ 
Sbjct: 33  TFFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQA 92

Query: 303 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHLVGFLVFRSRDEKPGHLPP 151
           LMH +R GL+Y+VMLAVMSFNGGVFIVAVAGHLVGF +F SR  K   +PP
Sbjct: 93  LMHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPP 143


>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  142 bits (357), Expect = 7e-32
 Identities = 70/124 (56%), Positives = 87/124 (70%), Gaps = 10/124 (8%)
 Frame = -2

Query: 483 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISHSKFIKKGSSHVSAGLLET 304
           +FYWGK AEILFSGWPGT +GMY             VEW+SH + IK GS+HV+AG+++T
Sbjct: 37  TFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQT 96

Query: 303 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHLVGFLVFRSR----------DEKPGHLP 154
           L+H IR GL Y+VMLA+MSFNGG+F+VAVAGH VGFLVF SR           EK  +L 
Sbjct: 97  LLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRGSETLRPSEKAFYLS 156

Query: 153 PITC 142
           P++C
Sbjct: 157 PMSC 160


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  142 bits (357), Expect = 7e-32
 Identities = 70/124 (56%), Positives = 87/124 (70%), Gaps = 10/124 (8%)
 Frame = -2

Query: 483 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISHSKFIKKGSSHVSAGLLET 304
           +FYWGK AEILFSGWPGT +GMY             VEW+SH + IK GS+HV+AG+++T
Sbjct: 54  TFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQT 113

Query: 303 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHLVGFLVFRSR----------DEKPGHLP 154
           L+H IR GL Y+VMLA+MSFNGG+F+VAVAGH VGFLVF SR           EK  +L 
Sbjct: 114 LLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRGSETLRPSEKAFYLS 173

Query: 153 PITC 142
           P++C
Sbjct: 174 PMSC 177


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  138 bits (347), Expect = 1e-30
 Identities = 65/102 (63%), Positives = 79/102 (77%)
 Frame = -2

Query: 483 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISHSKFIKKGSSHVSAGLLET 304
           +FYWGK AEILFSGWPG  +GMY             VEW+S+ + IK GS+H +AGL++T
Sbjct: 33  TFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGSTHAAAGLVQT 92

Query: 303 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHLVGFLVFRSR 178
           L+HTIR GL+Y+VMLA+MSFNGGVF+VAVAGH VGFLVF SR
Sbjct: 93  LLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSR 134


>ref|XP_002276084.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496072|gb|ADW93913.1| copper transporter [Vitis
           vinifera]
          Length = 152

 Score =  130 bits (327), Expect = 2e-28
 Identities = 59/102 (57%), Positives = 76/102 (74%)
 Frame = -2

Query: 483 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISHSKFIKKGSSHVSAGLLET 304
           +F+WGKNAEILFSGWPGTS+GMY             +EW+S S  +K G  +V+ GLL+T
Sbjct: 31  TFFWGKNAEILFSGWPGTSSGMYALALILVFVVALLLEWLSRSSLLKPGPHNVTTGLLQT 90

Query: 303 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHLVGFLVFRSR 178
            ++ IRSG SY++MLAVMSFNGG+F+ AVAGH +GFL+F SR
Sbjct: 91  ALYAIRSGFSYMLMLAVMSFNGGIFLAAVAGHALGFLIFGSR 132


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