BLASTX nr result
ID: Coptis23_contig00024223
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024223 (387 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21098.3| unnamed protein product [Vitis vinifera] 92 3e-17 ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4... 77 1e-12 emb|CAN76626.1| hypothetical protein VITISV_003542 [Vitis vinifera] 74 9e-12 ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 gb|JAA73542.1| Hypothetical protein, partial [Ixodes ricinus] 72 6e-11 >emb|CBI21098.3| unnamed protein product [Vitis vinifera] Length = 606 Score = 92.4 bits (228), Expect = 3e-17 Identities = 47/81 (58%), Positives = 59/81 (72%) Frame = +2 Query: 131 GMCKEPASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDL 310 GM K P + P + LSKV +S+ RRHFE +KEA+P +L VL+A++SELDDE +S +DL Sbjct: 145 GMSKAPNYYAPFLSGLSKVFLSIPRRHFEQVKEAVPVILSVLKAMTSELDDEDTNS-EDL 203 Query: 311 IDRAIGIANSIQEVCQKLEGR 373 RAI IANSIQ VC KL GR Sbjct: 204 FARAISIANSIQTVCGKLAGR 224 >ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4-like [Vitis vinifera] Length = 668 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/66 (59%), Positives = 50/66 (75%) Frame = +2 Query: 176 LSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAIGIANSIQEVC 355 + V +S+ RRHFE +KEA+P +L VL+A++SELDDE +S +DL RAI IANSIQ VC Sbjct: 219 VGNVFLSIPRRHFEQVKEAVPVILSVLKAMTSELDDEDTNS-EDLFARAISIANSIQTVC 277 Query: 356 QKLEGR 373 KL GR Sbjct: 278 GKLAGR 283 >emb|CAN76626.1| hypothetical protein VITISV_003542 [Vitis vinifera] Length = 395 Score = 74.3 bits (181), Expect = 9e-12 Identities = 38/63 (60%), Positives = 48/63 (76%) Frame = +2 Query: 185 VLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAIGIANSIQEVCQKL 364 V +S+ R HFE +KEA+P +L VL+A++SELDDE +S +DL RAI IANSIQ VC KL Sbjct: 30 VFLSIPRXHFEQVKEAVPVILSVLKAMTSELDDEDTNS-EDLFARAISIANSIQTVCGKL 88 Query: 365 EGR 373 GR Sbjct: 89 AGR 91 >ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1| predicted protein [Populus trichocarpa] Length = 568 Score = 73.2 bits (178), Expect = 2e-11 Identities = 39/88 (44%), Positives = 56/88 (63%) Frame = +2 Query: 110 KVLYTHKGMCKEPASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDET 289 + L + GM PL + +SKVL+++QRRHFE +K A+P +L VL+AV SE Sbjct: 99 EALDSWNGMVHAYDFVAPLLSGISKVLLAIQRRHFEQVKVAVPVILNVLKAVCSEFSARD 158 Query: 290 QDSYQDLIDRAIGIANSIQEVCQKLEGR 373 + +L RA+GIA+SI+ +C KLEGR Sbjct: 159 TEC-MNLFIRALGIADSIRAICAKLEGR 185 >gb|JAA73542.1| Hypothetical protein, partial [Ixodes ricinus] Length = 215 Score = 71.6 bits (174), Expect = 6e-11 Identities = 37/76 (48%), Positives = 48/76 (63%) Frame = +2 Query: 146 PASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAI 325 P F PL L KVL +QRRH+EH+K +P VL VL+ + SE D E D Y+ L +A Sbjct: 70 PGYFVPLLNGLMKVLALIQRRHYEHVKTTVPVVLNVLRIICSEPDYEDTD-YEKLFHKAA 128 Query: 326 GIANSIQEVCQKLEGR 373 GIA SI+ +C KLE + Sbjct: 129 GIACSIRAICAKLEDK 144