BLASTX nr result
ID: Coptis23_contig00024146
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00024146
(417 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002608349.1| orf185 [Vitis vinifera] gi|209954145|emb|CAQ... 178 5e-43
ref|XP_002536610.1| conserved hypothetical protein [Ricinus comm... 172 3e-41
ref|XP_002539035.1| conserved hypothetical protein [Ricinus comm... 172 3e-41
ref|YP_005090367.1| orf186 (mitochondrion) [Phoenix dactylifera]... 170 1e-40
ref|XP_002530828.1| conserved hypothetical protein [Ricinus comm... 159 2e-37
>ref|YP_002608349.1| orf185 [Vitis vinifera] gi|209954145|emb|CAQ77575.1| orf185 [Vitis
vinifera] gi|239764756|gb|ACS15226.1| ORF185 [Vitis
vinifera]
Length = 184
Score = 178 bits (451), Expect = 5e-43
Identities = 95/115 (82%), Positives = 98/115 (85%), Gaps = 2/115 (1%)
Frame = +1
Query: 55 STQFPFFSGALALYLRHT--RKDAVGSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL 228
S FP S LY+ T R GSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL
Sbjct: 74 SRSFPVHS----LYISDTQGRTRWEGSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL 129
Query: 229 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPRSPSKRSK 393
SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERN GLHSVTPRSPS+RS+
Sbjct: 130 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNGGLHSVTPRSPSERSE 184
Score = 88.6 bits (218), Expect = 5e-16
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +2
Query: 2 QRSCECAVMRRMLRHRIDRPSSRSFPVHSLCISDTQGRTRWEAALASVRP 151
QRSCECAVM RMLRHRIDRPSSRSFPVHSL ISDTQGRTRWE + S+ P
Sbjct: 53 QRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCP 102
>ref|XP_002536610.1| conserved hypothetical protein [Ricinus communis]
gi|223519108|gb|EEF25773.1| conserved hypothetical
protein [Ricinus communis]
Length = 184
Score = 172 bits (435), Expect = 3e-41
Identities = 93/115 (80%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
Frame = +1
Query: 55 STQFPFFSGALALYLRHT--RKDAVGSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL 228
S FP S LY+ T R GSSPSLCPADHSAGI HSR RLTAARGCSCRYVSL
Sbjct: 74 SRSFPVHS----LYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAARGCSCRYVSL 129
Query: 229 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPRSPSKRSK 393
SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERN GLHSVTPRSPS+RS+
Sbjct: 130 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNGGLHSVTPRSPSERSE 184
Score = 90.1 bits (222), Expect = 2e-16
Identities = 44/60 (73%), Positives = 48/60 (80%)
Frame = +2
Query: 2 QRSCECAVMRRMLRHRIDRPSSRSFPVHSLCISDTQGRTRWEAALASVRPIIPLASRIHA 181
QRSCECAVM RMLRHRIDRPSSRSFPVHSL ISDTQGRTRWE + S+ P A +H+
Sbjct: 53 QRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHS 112
>ref|XP_002539035.1| conserved hypothetical protein [Ricinus communis]
gi|223509127|gb|EEF23347.1| conserved hypothetical
protein [Ricinus communis]
Length = 124
Score = 172 bits (435), Expect = 3e-41
Identities = 93/115 (80%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
Frame = +1
Query: 55 STQFPFFSGALALYLRHT--RKDAVGSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL 228
S FP S LY+ T R GSSPSLCPADHSAGI HSR RLTAARGCSCRYVSL
Sbjct: 14 SRSFPVHS----LYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAARGCSCRYVSL 69
Query: 229 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPRSPSKRSK 393
SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERN GLHSVTPRSPS+RS+
Sbjct: 70 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNGGLHSVTPRSPSERSE 124
Score = 72.8 bits (177), Expect = 3e-11
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +2
Query: 26 MRRMLRHRIDRPSSRSFPVHSLCISDTQGRTRWEAALASVRPIIPLASRIHA 181
M RMLRHRIDRPSSRSFPVHSL ISDTQGRTRWE + S+ P A +H+
Sbjct: 1 MLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHS 52
>ref|YP_005090367.1| orf186 (mitochondrion) [Phoenix dactylifera]
gi|343478422|gb|AEM43910.1| orf186 (mitochondrion)
[Phoenix dactylifera]
Length = 185
Score = 170 bits (431), Expect = 1e-40
Identities = 92/115 (80%), Positives = 95/115 (82%), Gaps = 2/115 (1%)
Frame = +1
Query: 55 STQFPFFSGALALYLRHT--RKDAVGSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL 228
S FP S LY+ T R GSSPSLCPADHSAGI HSR RLTAARGCSCRYVSL
Sbjct: 75 SRSFPVHS----LYISDTQGRTRWEGSSPSLCPADHSAGILHSRLRLTAARGCSCRYVSL 130
Query: 229 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPRSPSKRSK 393
SGSLAPPVISFYDMLLSSPY ICHLVISASLRVSTSERN GLHSVTPRSPS+RS+
Sbjct: 131 SGSLAPPVISFYDMLLSSPYQICHLVISASLRVSTSERNGGLHSVTPRSPSERSE 185
Score = 83.6 bits (205), Expect = 2e-14
Identities = 42/60 (70%), Positives = 46/60 (76%)
Frame = +2
Query: 2 QRSCECAVMRRMLRHRIDRPSSRSFPVHSLCISDTQGRTRWEAALASVRPIIPLASRIHA 181
QRSCECAVM RMLRH IDR SSRSFPVHSL ISDTQGRTRWE + S+ P A +H+
Sbjct: 54 QRSCECAVMLRMLRHGIDRLSSRSFPVHSLYISDTQGRTRWEGSSPSLCPADHSAGILHS 113
>ref|XP_002530828.1| conserved hypothetical protein [Ricinus communis]
gi|223529592|gb|EEF31541.1| conserved hypothetical
protein [Ricinus communis]
Length = 229
Score = 159 bits (402), Expect = 2e-37
Identities = 86/115 (74%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Frame = +1
Query: 55 STQFPFFSGALALYLRHTRKDA--VGSSPSLCPADHSAGISHSRPRLTAARGCSCRYVSL 228
S FP S LY+ T+ GSSPSLCP DHSAGI HSR LT ARGCSCRYVSL
Sbjct: 119 SCSFPVHS----LYISDTQGKTWWEGSSPSLCPVDHSAGILHSRLHLTTARGCSCRYVSL 174
Query: 229 SGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPRSPSKRSK 393
SGSLAPPVISFYDMLLS PYSICHLVISASLRVSTSERN GLHS+T RSPS+RS+
Sbjct: 175 SGSLAPPVISFYDMLLSLPYSICHLVISASLRVSTSERNGGLHSLTLRSPSERSE 229
Score = 75.9 bits (185), Expect = 3e-12
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = +2
Query: 2 QRSCECAVMRRMLRHRIDRPSSRSFPVHSLCISDTQGRTRWEAALASVRPIIPLASRIHA 181
QRSCECAVM LRHRIDRPSS SFPVHSL ISDTQG+T WE + S+ P+ A +H+
Sbjct: 101 QRSCECAVM---LRHRIDRPSSCSFPVHSLYISDTQGKTWWEGSSPSLCPVDHSAGILHS 157