BLASTX nr result

ID: Coptis23_contig00023333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023333
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-22
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-21
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-21
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-21
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...   108   2e-21

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 91.7 bits (226), Expect(2) = 6e-22
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
 Frame = +2

Query: 401 ITADSDLFYLRFSCEGDKQMVLDAGPIFISGKIFVIRPWTVDFSMLWTRVDSITIWIKLS 580
           +++D+  F   F        VL+  P  ++ +  V++ W  +   L   +  + +W++L 
Sbjct: 188 LSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 247

Query: 581 KVPQELWTLNDLSYITSLIGIPLCMDEATAKKQRLNFARVSAVIPVVFDYPSSIKIKI-H 757
            VP E WT+  LS + S +G+PL  D  T  ++RL++ARV   I           ++  +
Sbjct: 248 NVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 307

Query: 758 GRHVVIGVEYPWKPQACSHCNRFGHVLSKC 847
           G  + I  EY W P  CS+CN FGH  + C
Sbjct: 308 GLFITISAEYEWIPSKCSNCNVFGHTTALC 337



 Score = 39.7 bits (91), Expect(2) = 6e-22
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 205 STTTVLKYFEPELDDGVATI--PQEIVDEGVAEMKDVLIGYFLEKRMSFPHVKTVLERIW 378
           S+   L +  P   DG  T+  P ++ ++G    K  L+G+F+ +++ +P V ++ +RIW
Sbjct: 120 SSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 179

Query: 379 KLKG 390
              G
Sbjct: 180 SSYG 183


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 91.3 bits (225), Expect(2) = 1e-21
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
 Frame = +2

Query: 401 ITADSDLFYLRFSCEGDKQMVLDAGPIFISGKIFVIRPWTVDFSMLWTRVDSITIWIKLS 580
           +++D+  F   F        VL+  P  ++ +  V++ W  +   L   +  + +W++L 
Sbjct: 188 LSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 247

Query: 581 KVPQELWTLNDLSYITSLIGIPLCMDEATAKKQRLNFARVSAVIPVVFDYPSSIKIKI-H 757
            VP E WT+  LS + S +G+PL  D  T  ++RL++ARV   I           ++  +
Sbjct: 248 NVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 307

Query: 758 GRHVVIGVEYPWKPQACSHCNRFGHVLSKC 847
           G  + I  EY W P  CS+CN FGH  + C
Sbjct: 308 GLFITISAEYEWIPSKCSNCNVFGHTTALC 337



 Score = 91.3 bits (225), Expect(2) = 1e-21
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
 Frame = +2

Query: 401  ITADSDLFYLRFSCEGDKQMVLDAGPIFISGKIFVIRPWTVDFSMLWTRVDSITIWIKLS 580
            +++D+  F   F        VL+  P  ++ +  V++ W  +   L   +  + +W++L 
Sbjct: 981  LSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLY 1040

Query: 581  KVPQELWTLNDLSYITSLIGIPLCMDEATAKKQRLNFARVSAVIPVVFDYPSSIKIKI-H 757
             VP E WT+  LS + S +G+PL  D  T  ++RL++ARV   I           ++  +
Sbjct: 1041 NVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 1100

Query: 758  GRHVVIGVEYPWKPQACSHCNRFGHVLSKC 847
            G  + I  EY W P  CS+CN FGH  + C
Sbjct: 1101 GLFITISAEYEWIPSKCSNCNVFGHTTALC 1130



 Score = 38.9 bits (89), Expect(2) = 1e-21
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 205 STTTVLKYFEPELDDGVATI--PQEIVDEGVAEMKDVLIGYFLEKRMSFPHVKTVLERIW 378
           S+   + +  P   DG  T+  P ++ ++G    K  L+G+F+ +++ +P V ++ +RIW
Sbjct: 120 SSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 179

Query: 379 KLKG 390
              G
Sbjct: 180 SSYG 183



 Score = 38.9 bits (89), Expect(2) = 1e-21
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 205  STTTVLKYFEPELDDGVATI--PQEIVDEGVAEMKDVLIGYFLEKRMSFPHVKTVLERIW 378
            S+   + +  P   DG  T+  P ++ ++G    K  L+G+F+ +++ +P V ++ +RIW
Sbjct: 913  SSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 972

Query: 379  KLKG 390
               G
Sbjct: 973  SSYG 976


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 91.3 bits (225), Expect(2) = 2e-21
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
 Frame = +2

Query: 401 ITADSDLFYLRFSCEGDKQMVLDAGPIFISGKIFVIRPWTVDFSMLWTRVDSITIWIKLS 580
           +++D+  F   F        VL+  P  ++ +  V++ W  +   L      + +W++L 
Sbjct: 188 LSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLY 247

Query: 581 KVPQELWTLNDLSYITSLIGIPLCMDEATAKKQRLNFARVSAVIPVVFDYPSSIKIKI-H 757
            VP E WT+  LS + S IG+PL  D  T  ++RL++ARV   I           ++  +
Sbjct: 248 NVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPN 307

Query: 758 GRHVVIGVEYPWKPQACSHCNRFGHVLSKC 847
           G  + I  EY W P  CS+CN FGH  + C
Sbjct: 308 GLFITISAEYEWIPSKCSNCNVFGHTTALC 337



 Score = 38.5 bits (88), Expect(2) = 2e-21
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 205 STTTVLKYFEPELDDGVATI--PQEIVDEGVAEMKDVLIGYFLEKRMSFPHVKTVLERIW 378
           S+   L +  P + DG   +  P ++ ++G    K  L+G+F+ +++ +P V ++ +RIW
Sbjct: 120 SSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 179

Query: 379 KLKG 390
              G
Sbjct: 180 SSYG 183


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 88.2 bits (217), Expect(2) = 2e-21
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
 Frame = +2

Query: 389 GAMEI-TADSDLFYLRFSCEGDKQMVLDAGPIFISGKIFVIRPWTVDFSMLWTRVDSITI 565
           G +E+ ++D+  F   F        VL+  P  ++    V++ W  +   L   +  + +
Sbjct: 183 GLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKDDLARVPV 242

Query: 566 WIKLSKVPQELWTLNDLSYITSLIGIPLCMDEATAKKQRLNFARVSAVIPVVFDYPSSIK 745
           W+ L  VP E WT+  LS + S IG+PL  D  T  ++RL++ARV   I           
Sbjct: 243 WVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASKTLVKEYD 302

Query: 746 IKI-HGRHVVIGVEYPWKPQACSHCNRFGHVLSKC 847
           ++  +G  + I  EY W P  CS+CN FGH  + C
Sbjct: 303 LRCPNGLFITISAEYEWIPSKCSNCNVFGHTRTLC 337



 Score = 41.2 bits (95), Expect(2) = 2e-21
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +1

Query: 205 STTTVLKYFEPELDDGVATI--PQEIVDEGVAEMKDVLIGYFLEKRMSFPHVKTVLERIW 378
           S+   L +  P + DG  T+  P ++ ++G    K  L+G+F+ +++ +P V ++ +RIW
Sbjct: 120 SSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRIW 179

Query: 379 KLKG 390
              G
Sbjct: 180 SSYG 183


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score =  108 bits (270), Expect = 2e-21
 Identities = 51/147 (34%), Positives = 79/147 (53%)
 Frame = +2

Query: 410 DSDLFYLRFSCEGDKQMVLDAGPIFISGKIFVIRPWTVDFSMLWTRVDSITIWIKLSKVP 589
           ++ +   +F C    + +L  GP  + GK  ++R WT          DS+ +WIKL ++P
Sbjct: 2   ENGIICFQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIP 61

Query: 590 QELWTLNDLSYITSLIGIPLCMDEATAKKQRLNFARVSAVIPVVFDYPSSIKIKIHGRHV 769
            ELWT   L  + S IG PL +D AT ++ RL++AR+   + V    P  I + + G   
Sbjct: 62  LELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNLRGEEF 121

Query: 770 VIGVEYPWKPQACSHCNRFGHVLSKCP 850
           ++ V Y WKP+ C+ C+ FGH  S CP
Sbjct: 122 IVPVTYEWKPRKCNLCHSFGHSQSTCP 148


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