BLASTX nr result

ID: Coptis23_contig00023036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023036
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158688.1| PREDICTED: LOW QUALITY PROTEIN: protein BREA...    94   2e-17
ref|XP_004134902.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    94   2e-17
ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    91   9e-17
emb|CBI30968.3| unnamed protein product [Vitis vinifera]               91   9e-17

>ref|XP_004158688.1| PREDICTED: LOW QUALITY PROTEIN: protein BREAST CANCER
           SUSCEPTIBILITY 1 homolog [Cucumis sativus]
          Length = 1072

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -1

Query: 188 STLGCYDTNCRKSFHVPCAKLVPQCRWDTETFVMLCPLHPSTKLPKE 48
           + LGCYD NCRKSFHVPCAKL+PQC+WDTE FVMLCPLHP +KLP +
Sbjct: 760 AALGCYDKNCRKSFHVPCAKLMPQCQWDTENFVMLCPLHPDSKLPSQ 806


>ref|XP_004134902.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
           sativus]
          Length = 1100

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -1

Query: 188 STLGCYDTNCRKSFHVPCAKLVPQCRWDTETFVMLCPLHPSTKLPKE 48
           + LGCYD NCRKSFHVPCAKL+PQC+WDTE FVMLCPLHP +KLP +
Sbjct: 788 AALGCYDKNCRKSFHVPCAKLMPQCQWDTENFVMLCPLHPDSKLPSQ 834


>ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|222847593|gb|EEE85140.1|
           predicted protein [Populus trichocarpa]
          Length = 1029

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = -1

Query: 188 STLGCYDTNCRKSFHVPCAKLVPQCRWDTETFVMLCPLHPSTKLPKELLESQRKRQKQSI 9
           + LGCY+ +CRKSFHVPCAKL  QCRWDTE FV+LCPLH S KLP E  +SQ +R+K  I
Sbjct: 716 AALGCYEKSCRKSFHVPCAKLTHQCRWDTENFVILCPLHASCKLPNESKQSQ-ERRKNCI 774

Query: 8   SK 3
           SK
Sbjct: 775 SK 776


>ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
           vinifera]
          Length = 1044

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 STLGCYDTNCRKSFHVPCAKLVPQCRWDTETFVMLCPLHPSTKLPKELLESQRKRQKQSI 9
           + LGCY+ +CRKSFH PCAKL PQCRWDT+ FVMLCPLH S+KLP E+     K +K+  
Sbjct: 729 AALGCYEKSCRKSFHFPCAKLTPQCRWDTDNFVMLCPLHASSKLPNEISGPPAKTRKKCS 788

Query: 8   SK 3
           +K
Sbjct: 789 TK 790


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = -1

Query: 188  STLGCYDTNCRKSFHVPCAKLVPQCRWDTETFVMLCPLHPSTKLPKELLESQRKRQKQSI 9
            + LGCY+ +CRKSFH PCAKL PQCRWDT+ FVMLCPLH S+KLP E+     K +K+  
Sbjct: 1098 AALGCYEKSCRKSFHFPCAKLTPQCRWDTDNFVMLCPLHASSKLPNEISGPPAKTRKKCS 1157

Query: 8    SK 3
            +K
Sbjct: 1158 TK 1159


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