BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023008
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    269   1e-69
emb|CBI23113.3| unnamed protein product [Vitis vinifera]              269   1e-69
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       237   4e-60
ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabi...   224   4e-56

>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  269 bits (687), Expect = 1e-69
 Identities = 140/235 (59%), Positives = 176/235 (74%)
 Frame = +3

Query: 15   ENACMEFDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVI 194
            ENACMEFD++NLKPTYKILWG+PGRSNAINIAERLG+P  VLD ARE YG ASAEINEVI
Sbjct: 558  ENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVI 617

Query: 195  IEMEQFKQDLQKHVQEADHYLILSRELHENLLAVNEKITEHRITQRYRMMKEVSEVAAMA 374
            I+ME+FKQ+ Q+ V +A +YL+LSR+L+ENLL    K+ EH   QRY  M+EVSE AA+A
Sbjct: 618  IDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVA 677

Query: 375  RSTLHKRLRQLRESISHSPQATVITTRQKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKK 554
            RS LHK++RQLR S +   Q T     Q     + Q   A    +  +++S   A+ A++
Sbjct: 678  RSLLHKKVRQLRSSATRPSQPTAADKSQHASATSNQHTAADINERPTTSESKHPAKVAQQ 737

Query: 555  SPSENRITLPKVGDMVHVLSLGKKATVLKVEPSKEEVVVQASNMKLRLKLSDLQT 719
            S SE +  +PKVGDMVHV SLGKKATVL+VE SK ++VVQA NMKL+LKL+D++T
Sbjct: 738  SSSEKK-RVPKVGDMVHVSSLGKKATVLEVESSKGQLVVQAGNMKLKLKLTDVET 791


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  269 bits (687), Expect = 1e-69
 Identities = 140/235 (59%), Positives = 176/235 (74%)
 Frame = +3

Query: 15   ENACMEFDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVI 194
            ENACMEFD++NLKPTYKILWG+PGRSNAINIAERLG+P  VLD ARE YG ASAEINEVI
Sbjct: 574  ENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVI 633

Query: 195  IEMEQFKQDLQKHVQEADHYLILSRELHENLLAVNEKITEHRITQRYRMMKEVSEVAAMA 374
            I+ME+FKQ+ Q+ V +A +YL+LSR+L+ENLL    K+ EH   QRY  M+EVSE AA+A
Sbjct: 634  IDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVA 693

Query: 375  RSTLHKRLRQLRESISHSPQATVITTRQKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKK 554
            RS LHK++RQLR S +   Q T     Q     + Q   A    +  +++S   A+ A++
Sbjct: 694  RSLLHKKVRQLRSSATRPSQPTAADKSQHASATSNQHTAADINERPTTSESKHPAKVAQQ 753

Query: 555  SPSENRITLPKVGDMVHVLSLGKKATVLKVEPSKEEVVVQASNMKLRLKLSDLQT 719
            S SE +  +PKVGDMVHV SLGKKATVL+VE SK ++VVQA NMKL+LKL+D++T
Sbjct: 754  SSSEKK-RVPKVGDMVHVSSLGKKATVLEVESSKGQLVVQAGNMKLKLKLTDVET 807


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
            predicted protein [Populus trichocarpa]
          Length = 864

 Score =  244 bits (622), Expect = 3e-62
 Identities = 133/247 (53%), Positives = 170/247 (68%), Gaps = 14/247 (5%)
 Frame = +3

Query: 15   ENACMEFDDINLKPTYKILWGVP--------------GRSNAINIAERLGLPNTVLDNAR 152
            ENACMEFD++NLKPTYKILWGVP              GRSNAINI+E+LGLP+ V+ NAR
Sbjct: 619  ENACMEFDEVNLKPTYKILWGVPVTILHNITAAVFPIGRSNAINISEKLGLPSVVVSNAR 678

Query: 153  ELYGTASAEINEVIIEMEQFKQDLQKHVQEADHYLILSRELHENLLAVNEKITEHRITQR 332
            EL+G ASAEINEVII+ME+FKQD Q+ + EA H+L+LS+ LHE L     KI EH   QR
Sbjct: 679  ELHGAASAEINEVIIDMERFKQDSQELLHEARHHLMLSKNLHEKLKLARRKIKEHGTEQR 738

Query: 333  YRMMKEVSEVAAMARSTLHKRLRQLRESISHSPQATVITTRQKNLVDNKQKITAKEAHQE 512
            YR M+++SE A+MARS LHK++RQLR   +H+ Q    T  QK L  +  + TA+  +  
Sbjct: 739  YRKMRQISEAASMARSILHKKVRQLR---AHATQTFQPTADQKQLSTSDSRFTAEAKNGR 795

Query: 513  VSNDSHLYAEYAKKSPSENRITLPKVGDMVHVLSLGKKATVLKVEPSKEEVVVQASNMKL 692
             +           K PS     LP+VGDMV V SLG+KATVL+V+ SKEE++VQA NMKL
Sbjct: 796  PTESMSTSVVEINKQPSA-MTELPEVGDMVQVSSLGRKATVLRVDRSKEEILVQAGNMKL 854

Query: 693  RLKLSDL 713
            +LKL+++
Sbjct: 855  KLKLAEI 861


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  237 bits (604), Expect = 4e-60
 Identities = 126/234 (53%), Positives = 164/234 (70%)
 Frame = +3

Query: 15   ENACMEFDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVI 194
            ENACMEFD++NLKPTYK+LWGVPGRSNAINIAERLGLP+ V+D AR LYG+ASAEI+EVI
Sbjct: 558  ENACMEFDEVNLKPTYKVLWGVPGRSNAINIAERLGLPSVVVDTARMLYGSASAEIDEVI 617

Query: 195  IEMEQFKQDLQKHVQEADHYLILSRELHENLLAVNEKITEHRITQRYRMMKEVSEVAAMA 374
             +ME+ KQ+ Q+ + EA HYL  SR L+ +LL    KI E+    R++ M++VSE AAMA
Sbjct: 618  TDMERLKQEYQELLDEARHYLRHSRGLYNSLLNTRRKIIEYSTNLRFKKMRDVSEAAAMA 677

Query: 375  RSTLHKRLRQLRESISHSPQATVITTRQKNLVDNKQKITAKEAHQEVSNDSHLYAEYAKK 554
            RS LHK++R+L  S     Q     +       NK +  A+     +++ S    +   +
Sbjct: 678  RSILHKKVRELDASAKQPSQNNKTISSSNLSATNKSQTVAENKEPTIADKSASSVKVFNR 737

Query: 555  SPSENRITLPKVGDMVHVLSLGKKATVLKVEPSKEEVVVQASNMKLRLKLSDLQ 716
            S S+ +   PKVGDMVHV SLGK+ TVLKV+ SK E+VVQA NMKL+LKL+D+Q
Sbjct: 738  SRSD-KSGPPKVGDMVHVSSLGKQVTVLKVDSSKGEIVVQAGNMKLKLKLTDIQ 790


>ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
            gi|332009066|gb|AED96449.1| DNA mismatch repair protein
            MutS, type 2 [Arabidopsis thaliana]
          Length = 796

 Score =  224 bits (570), Expect = 4e-56
 Identities = 117/237 (49%), Positives = 161/237 (67%)
 Frame = +3

Query: 3    STGVENACMEFDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEI 182
            ++  ENACMEFDD+NLKPTYKILWGVPGRSNAINIA+RLGLP  ++++ARELYG+ASAEI
Sbjct: 567  NSAFENACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEI 626

Query: 183  NEVIIEMEQFKQDLQKHVQEADHYLILSRELHENLLAVNEKITEHRITQRYRMMKEVSEV 362
            NEVI++ME++KQ+ Q+ + E+  Y+ LSRELHENLL   + I +H   +R +M +E+++ 
Sbjct: 627  NEVILDMERYKQEYQRLLNESRVYIRLSRELHENLLTAQKNINDHSTKERRKMRQELTQA 686

Query: 363  AAMARSTLHKRLRQLRESISHSPQATVITTRQKNLVDNKQKITAKEAHQEVSNDSHLYAE 542
             +M RSTL + L+Q R S   S Q+ V T  Q  +   K +     +   V         
Sbjct: 687  GSMTRSTLRRTLQQFRSSAGKSSQSKVATQLQTKVKTTKDEDNGIRSSSVVER------- 739

Query: 543  YAKKSPSENRITLPKVGDMVHVLSLGKKATVLKVEPSKEEVVVQASNMKLRLKLSDL 713
              +  P      +P+VG  V V SLGKKATVLKVE SK+E++VQ   MK+++KL+D+
Sbjct: 740  --RPLPEAAAQKVPEVGSSVFVSSLGKKATVLKVEHSKKEILVQVGIMKMKVKLTDV 794