BLASTX nr result

ID: Coptis23_contig00022910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022910
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525331.1| Disease resistance protein RGA2, putative [R...   290   5e-76
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   286   7e-75
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   284   3e-74
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   282   8e-74
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   281   1e-73

>ref|XP_002525331.1| Disease resistance protein RGA2, putative [Ricinus communis]
            gi|223535390|gb|EEF37064.1| Disease resistance protein
            RGA2, putative [Ricinus communis]
          Length = 1308

 Score =  290 bits (741), Expect = 5e-76
 Identities = 165/362 (45%), Positives = 236/362 (65%), Gaps = 28/362 (7%)
 Frame = -3

Query: 1004 ILPALRLSYQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFIL-PKAGRRMEDVG 828
            ILPALRLSY  LP HLK+CFAYCAVFPK Y F KE+L+L W A+GFI+ PK  R  EDVG
Sbjct: 410  ILPALRLSYHYLPPHLKRCFAYCAVFPKDYNFSKEELILLWRAEGFIVQPKGSREKEDVG 469

Query: 827  SDYFDNLMNRSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVR 648
            ++YF++L++RSFFQ++    +    ++MHDLI++LAK+VSG+ CF  E GD   +++  R
Sbjct: 470  AEYFEDLVSRSFFQKSHLYKSA---FVMHDLINDLAKYVSGEFCFQWENGDSCEVAKRTR 526

Query: 647  HLSFLKGEVSESM-YGALYRSRNLRTI------LTSSELRYPLHDN-------------- 531
            HLS+L+     S+ + ++YR+++LRT+       T  +++Y L  +              
Sbjct: 527  HLSYLRTNHDTSVKFESIYRAKHLRTLRVKWSWWTDRKVKYDLLPSLRRLRVLSLFQCDD 586

Query: 530  ----PFTLCNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLTN 363
                P T+ NLKHLRYLDLS T IK L  ++  L +L+TL +  C++L+ LP  + SL +
Sbjct: 587  VVLLPNTIGNLKHLRYLDLSGTSIKRLPDSINSLYNLETLLMYGCQDLIKLPITMSSLIS 646

Query: 362  LRHLDLEKNLRLISMPPGMGRLTGLQTLSTFVVGVESGCKIGELKDMRNLRGTLCISNLE 183
            L HLD+ +  +L  MP  M +LT L+ L+ FV+G ESG  I EL +++NLRG+LCI NL+
Sbjct: 647  LCHLDI-RETKLQEMPLKMSKLTKLEMLTDFVLGKESGSSIKELGELQNLRGSLCIWNLQ 705

Query: 182  NVA-MQEANQAALNDKPHLRRLKLLWRGASDNN-DEQEVLAGLRPHQNIKELQIEHYGGA 9
            NVA  Q+A  A L +K HLR L L W G +D++  E+ ++  L+PH N++ L I  YGG 
Sbjct: 706  NVADAQDAMAANLKNKKHLRMLDLRWDGETDDSLHERAIVEQLQPHMNVESLCIVGYGGT 765

Query: 8    RF 3
            RF
Sbjct: 766  RF 767


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  286 bits (731), Expect = 7e-75
 Identities = 167/365 (45%), Positives = 217/365 (59%), Gaps = 31/365 (8%)
 Frame = -3

Query: 1004 ILPALRLSYQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGS 825
            ILPALRLSY  LP HLKQCF +C+VFPK Y F+KE LVL WIA+GF+L K  + +ED+GS
Sbjct: 393  ILPALRLSYNHLPEHLKQCFVFCSVFPKDYNFEKETLVLLWIAEGFVLAKGRKHLEDLGS 452

Query: 824  DYFDNLMNRSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRH 645
            DYFD L+ RSFFQ +    N+S  ++MHDL+H+LA++++GD CF +E G    IS   RH
Sbjct: 453  DYFDELLLRSFFQRSKF--NSSKFFVMHDLVHDLAQYLAGDLCFRLEEGKSQSISERARH 510

Query: 644  LSFLKGEVSESM-YGALYRSRNLRTIL-------TSSELRYPLHDN-------------- 531
             + L       + + AL  + NLRT++       + +     LHD               
Sbjct: 511  AAVLHNTFKSGVTFEALGTTTNLRTVILLHGNERSETPKAIVLHDLLPTLRCLRVLDLSH 570

Query: 530  ------PFTLCNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISL 369
                  P  +  LKHLRYL+LS T IK L  +VC L +LQ+L L  C  L  LP  +  L
Sbjct: 571  IAVEEIPDMVGRLKHLRYLNLSSTRIKMLPPSVCTLYNLQSLILMNCNNLKGLPNDMKKL 630

Query: 368  TNLRHLDLEKNLRLISMPPGMGRLTGLQTLSTFVVGVESGCKIGELKDMRNLRGTLCISN 189
             NLRHL+L     LI MPP +G LT L+TL  FVV  E GC IGELK M  LR TL I  
Sbjct: 631  LNLRHLNLTGCWHLICMPPQIGELTCLRTLHRFVVAKEKGCGIGELKGMTELRATLIIDR 690

Query: 188  LENVAM-QEANQAALNDKPHLRRLKLLWRGA--SDNNDEQEVLAGLRPHQNIKELQIEHY 18
            LE+V+M  E  +A L +K +LRRL+L W       +   +E+L  L PH N+KEL+I+ Y
Sbjct: 691  LEDVSMVSEGREANLKNKQYLRRLELKWSPGHHMPHAIGEELLECLEPHGNLKELKIDVY 750

Query: 17   GGARF 3
             GA+F
Sbjct: 751  HGAKF 755


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 961

 Score =  284 bits (726), Expect = 3e-74
 Identities = 166/365 (45%), Positives = 216/365 (59%), Gaps = 31/365 (8%)
 Frame = -3

Query: 1004 ILPALRLSYQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGS 825
            ILPALRLSY  LP HLKQCF +C+VFPK Y F+KE LVL WIA+GF+L K  + +ED+GS
Sbjct: 300  ILPALRLSYNHLPEHLKQCFVFCSVFPKDYNFEKETLVLLWIAEGFVLAKGRKHLEDLGS 359

Query: 824  DYFDNLMNRSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRH 645
            DYFD L+ RSFFQ +    N+S  ++MHDL+H+LA++++GD CF +E G    IS   RH
Sbjct: 360  DYFDELLLRSFFQRSKI--NSSKFFVMHDLVHDLAQYLAGDLCFRLEEGKSQSISERARH 417

Query: 644  LSFLKGEVSESM-YGALYRSRNLRTIL-------TSSELRYPLHD--------------- 534
             + L       + + AL  + NLRT++       + +     LHD               
Sbjct: 418  AAVLHNTFKSGVTFEALGTTTNLRTVILLHGNERSETPKAIVLHDLLPSLRCLRVLDLSH 477

Query: 533  -----NPFTLCNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISL 369
                  P  +  LKHLRYL+LS T IK L  +VC L +LQ+L L  C  L  LP  +  L
Sbjct: 478  IAVEEIPDMVGRLKHLRYLNLSSTRIKMLPPSVCTLYNLQSLILMNCNNLKGLPIDMKKL 537

Query: 368  TNLRHLDLEKNLRLISMPPGMGRLTGLQTLSTFVVGVESGCKIGELKDMRNLRGTLCISN 189
             NLRHL+L     LI MPP +G LT L+TL  F V  E GC IGELK M  LR TL I  
Sbjct: 538  LNLRHLNLTGCWHLICMPPQIGELTCLRTLHRFFVAKEKGCGIGELKGMTELRATLIIDR 597

Query: 188  LENVAM-QEANQAALNDKPHLRRLKLLWRGA--SDNNDEQEVLAGLRPHQNIKELQIEHY 18
            LE+V+M  E  +A L +K +LRRL+L W       +   +E+L  L PH N+KEL+I+ Y
Sbjct: 598  LEDVSMVSEGREANLKNKQYLRRLELKWSPGHHMPHATGEELLECLEPHGNLKELKIDVY 657

Query: 17   GGARF 3
             GA+F
Sbjct: 658  HGAKF 662


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  282 bits (722), Expect = 8e-74
 Identities = 158/364 (43%), Positives = 221/364 (60%), Gaps = 30/364 (8%)
 Frame = -3

Query: 1004 ILPALRLSYQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGS 825
            ILPALRLSY  LP+HLKQCF +C++FPK ++FDKE LVL W+A+GF+ PK  RR+EDV S
Sbjct: 402  ILPALRLSYNQLPAHLKQCFVFCSIFPKDHEFDKEDLVLLWMAEGFVHPKGRRRLEDVAS 461

Query: 824  DYFDNLMNRSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRH 645
            DYFD+L+ RSFFQ++  + +    ++MHDLIH+LA+ V+G+ CF +E      I  NVRH
Sbjct: 462  DYFDDLLLRSFFQQSKTNLS---NFVMHDLIHDLAESVAGEICFRLEGEKLQDIPENVRH 518

Query: 644  LSFLKGEVSESMYGALYRSRNLRTIL-----TSSEL----------------------RY 546
             S    +    +Y AL+  + LRT+L     TS E+                        
Sbjct: 519  TSVSVDKCKSVIYEALHMKKGLRTMLLLCSETSREVSNVKVLHDLISSLKCLRSLDMSHI 578

Query: 545  PLHDNPFTLCNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLT 366
             + D P ++ +L H+RYL+LS T IK L  ++C L +LQTL L  C + L+LPK    L 
Sbjct: 579  AIKDLPGSVGDLMHMRYLNLSYTEIKELPDSICNLCNLQTLILVGCNKFLTLPKCTKDLV 638

Query: 365  NLRHLDLEKNLRLISMPPGMGRLTGLQTLSTFVVGVESGCKIGELKDMRNLRGTLCISNL 186
            NLRHL+L     L SMPP  G+LT LQ L  FVVG    C + ELK+M  LR TLCI  +
Sbjct: 639  NLRHLNLTGCWHLKSMPPSFGKLTSLQRLHRFVVGKGVECGLNELKNMNELRDTLCIDRV 698

Query: 185  ENVA-MQEANQAALNDKPHLRRLKLLWRGASDNND--EQEVLAGLRPHQNIKELQIEHYG 15
            E+V  +++A + +L  K ++ +L L W  +  + D  ++E+L  L PH N++EL ++ Y 
Sbjct: 699  EDVLNIEDAKEVSLKSKQYIHKLVLRWSRSQYSQDAIDEELLEYLEPHTNLRELMVDVYP 758

Query: 14   GARF 3
            G RF
Sbjct: 759  GTRF 762


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score =  281 bits (720), Expect = 1e-73
 Identities = 160/358 (44%), Positives = 219/358 (61%), Gaps = 24/358 (6%)
 Frame = -3

Query: 1004 ILPALRLSYQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGS 825
            ILPALRLSY  LP+HLKQCF YC++FPK + FD+EKLVL W+A+GF++ K  R +EDV S
Sbjct: 404  ILPALRLSYNHLPAHLKQCFIYCSIFPKDHNFDEEKLVLLWMAEGFVISKGRRCLEDVAS 463

Query: 824  DYFDNLMNRSFFQEAPADSNTSP-RYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVR 648
             YF +L+ RSFFQ     S T+P +++MHDLIH+LA+FV+G+ CF ++V     I   VR
Sbjct: 464  GYFHDLLLRSFFQR----SKTNPSKFVMHDLIHDLAQFVAGESCFTLDVKKLQDIGEKVR 519

Query: 647  HLSFLKGEVSESMYGALYRSRNLRTILT---------------------SSELRYP-LHD 534
            H S L  +     + A   S++LRT+L                      S +L Y  + +
Sbjct: 520  HSSVLVNKSESVPFEAFRTSKSLRTMLLLCREPRAKVPHDLILSLRCLRSLDLCYSAIKE 579

Query: 533  NPFTLCNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLTNLRH 354
             P  + NL+H+R+LDLS T I+ L +++C L +LQTL L  CK L +LP     L NLRH
Sbjct: 580  LPDLMGNLRHIRFLDLSHTSIRVLPESICSLYNLQTLVLINCKNLHALPGDTNHLVNLRH 639

Query: 353  LDLEKNLRLISMPPGMGRLTGLQTLSTFVVGVESGCKIGELKDMRNLRGTLCISNLENVA 174
            L+L    +LISMPP +G+LT LQ L   V G   GC IGELK+M  LR TLCI  + +V 
Sbjct: 640  LNLTGCGQLISMPPDIGKLTSLQRLHRIVAGKGIGCGIGELKNMNELRATLCIDTVGDVP 699

Query: 173  -MQEANQAALNDKPHLRRLKLLWRGASDNNDEQEVLAGLRPHQNIKELQIEHYGGARF 3
             + EA +A L  K ++  L L W     +  + E+L  L PH N++EL+I+ Y GA+F
Sbjct: 700  NITEAKEANLKKKQYINELVLRWGRCRPDGIDDELLECLEPHTNLRELRIDVYPGAKF 757


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