BLASTX nr result

ID: Coptis23_contig00022862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022862
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21425.1| putative translation elongation factor P [Oryza s...   298   1e-78
gb|ACG41065.1| elongation factor P [Zea mays]                         295   8e-78
ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|...   295   8e-78
ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [S...   291   1e-76
ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachyp...   289   6e-76

>gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica
           Group]
          Length = 247

 Score =  298 bits (764), Expect = 1e-78
 Identities = 138/199 (69%), Positives = 176/199 (88%)
 Frame = +1

Query: 82  LFTTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDS 261
           L   PW AIQ RGAK+LG++V++G VI+R+GRI+QVIK QH+ QGRGGATIQVELRDVD+
Sbjct: 49  LAAAPWAAIQRRGAKMLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDT 108

Query: 262 GNKVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGTTAAYLH 441
           GNK+TERFRTDEALE+VFVE K+FT+LY EGD V +M+P TF+QLE+SK+LFG TAAYL 
Sbjct: 109 GNKITERFRTDEALERVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELFGKTAAYLK 168

Query: 442 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 621
           ++MKV++Q++DG+PMSASVP RVTCTV EA+ H KG+TA PQYK+VLL+NGLTV+ PPF+
Sbjct: 169 DEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFV 228

Query: 622 EAGDQIVINTLEDTYMERA 678
           EAG++IV++T +D+YM RA
Sbjct: 229 EAGEKIVVSTADDSYMTRA 247


>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  295 bits (756), Expect = 8e-78
 Identities = 139/199 (69%), Positives = 174/199 (87%)
 Frame = +1

Query: 82  LFTTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDS 261
           L T PW A Q RGAK+LG+DV++G VI+R+G I+QVIK QH+ QGRGGATIQVELRDVD+
Sbjct: 48  LATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDT 107

Query: 262 GNKVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGTTAAYLH 441
           GNK+TERFRTDEALE+VFVE K+FT+LY EGDTV +M+P TF+QLE+SK+LFG  AAYL 
Sbjct: 108 GNKITERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLK 167

Query: 442 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 621
           ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI
Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 227

Query: 622 EAGDQIVINTLEDTYMERA 678
           EAG+ IVI+T +D+YM RA
Sbjct: 228 EAGENIVISTADDSYMTRA 246


>ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1|
           elongation factor P [Zea mays]
          Length = 246

 Score =  295 bits (756), Expect = 8e-78
 Identities = 139/199 (69%), Positives = 174/199 (87%)
 Frame = +1

Query: 82  LFTTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDS 261
           L T PW A Q RGAK+LG+DV++G VI+R+G I+QVIK QH+ QGRGGATIQVELRDVD+
Sbjct: 48  LATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDT 107

Query: 262 GNKVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGTTAAYLH 441
           GNK+TERFRTDEALE+VFVE K+FT+LY EGDTV +M+P TF+QLE+SK+LFG  AAYL 
Sbjct: 108 GNKITERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLK 167

Query: 442 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 621
           ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI
Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 227

Query: 622 EAGDQIVINTLEDTYMERA 678
           EAG+ IVI+T +D+YM RA
Sbjct: 228 EAGENIVISTADDSYMTRA 246


>ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [Sorghum bicolor]
           gi|241917550|gb|EER90694.1| hypothetical protein
           SORBIDRAFT_01g004430 [Sorghum bicolor]
          Length = 246

 Score =  291 bits (746), Expect = 1e-76
 Identities = 136/199 (68%), Positives = 174/199 (87%)
 Frame = +1

Query: 82  LFTTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDS 261
           L   PW A Q RG K+LG+DV++G +I+R+GRI+QVIK QH+ QGRGGATIQVELRDVD+
Sbjct: 48  LAAAPWAATQRRGVKMLGSDVKLGNIIQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDT 107

Query: 262 GNKVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGTTAAYLH 441
           GNK+TERFRTDEALE+VFVE K+FT+LY EGDTV +M+P TF+QLE+SK+LFG  AAYL 
Sbjct: 108 GNKLTERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLK 167

Query: 442 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 621
           ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGL+V+APPFI
Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLSVLAPPFI 227

Query: 622 EAGDQIVINTLEDTYMERA 678
           EAG++IVI+T +D+YM RA
Sbjct: 228 EAGEKIVISTADDSYMTRA 246


>ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachypodium distachyon]
          Length = 248

 Score =  289 bits (740), Expect = 6e-76
 Identities = 135/195 (69%), Positives = 170/195 (87%)
 Frame = +1

Query: 91  TPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDSGNK 270
           TPW A Q RGAK+LG+DV++G VI+RKG I+QVIK QH+ QGRGGATIQVELRDVD+GNK
Sbjct: 54  TPWAATQRRGAKMLGSDVKLGNVIQRKGHIYQVIKAQHSHQGRGGATIQVELRDVDTGNK 113

Query: 271 VTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGTTAAYLHEDM 450
           + ERFRTDEALE+VFVE K+FT+LY EGD V +M+PNTF+Q+E+SKDLFG  AAYL ++M
Sbjct: 114 IVERFRTDEALERVFVEEKSFTYLYQEGDNVALMEPNTFEQIEVSKDLFGKAAAYLKDEM 173

Query: 451 KVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFIEAG 630
           +V++Q+YDG+ +S SVP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFIEAG
Sbjct: 174 RVTLQYYDGRAVSGSVPPRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIEAG 233

Query: 631 DQIVINTLEDTYMER 675
           + IVI T++D+Y+ R
Sbjct: 234 ESIVITTVDDSYVTR 248


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