BLASTX nr result

ID: Coptis23_contig00020843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020843
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281151.1| PREDICTED: long chain acyl-CoA synthetase 2 ...   443   e-122
ref|XP_002313075.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_004170472.1| PREDICTED: long chain acyl-CoA synthetase 2-...   436   e-120
ref|XP_004154333.1| PREDICTED: long chain acyl-CoA synthetase 2-...   436   e-120
ref|XP_004145346.1| PREDICTED: long chain acyl-CoA synthetase 2-...   436   e-120

>ref|XP_002281151.1| PREDICTED: long chain acyl-CoA synthetase 2 [Vitis vinifera]
            gi|297741400|emb|CBI32531.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  443 bits (1140), Expect = e-122
 Identities = 212/258 (82%), Positives = 234/258 (90%)
 Frame = -1

Query: 927  LRVTSCSILSQGYGLTESCGGCFTSIANVFSMIGTVGVPGLTIEARLESVPEMGYDALST 748
            LRVTSCS+LSQGYGLTESCGGC TSI N FSM+GTVGVP  TIEARLESVPEMGYDALS 
Sbjct: 402  LRVTSCSVLSQGYGLTESCGGCLTSIVNEFSMMGTVGVPYPTIEARLESVPEMGYDALSN 461

Query: 747  VPRGEICLRGKTLFTGYHKRPDLTEEVVVDGWFHTGDIGEWQPNGAMKIIDRRKNIFKLS 568
            VPRGEICLRGKTLF+GY KR DLTE  +VDGWFHTGDIGEWQPNGAMKIIDR+KNIFKLS
Sbjct: 462  VPRGEICLRGKTLFSGYFKRQDLTESALVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLS 521

Query: 567  QGEYVAVEKLENTFGQCPLITAIWVYGNSFESFLVAVVVPDRKALEDWAAAHHENGEFRS 388
            QGEYVAVE LENT+ +CPLIT+IWVYGNSFESFLVAVVVPD+KALEDWA  H+  G+F+S
Sbjct: 522  QGEYVAVENLENTYSRCPLITSIWVYGNSFESFLVAVVVPDKKALEDWAENHNVTGDFKS 581

Query: 387  MCENPKARKYILDELNSTGQKQKLKGFEMLRAVHLEPIPFDFERDLITPTFKLKRPQLLK 208
            +CEN +ARKYILDELN+TGQ  +LKGFE L+AVHL+P PFD ERDL+TPTFKLKRPQLLK
Sbjct: 582  LCENLEARKYILDELNNTGQNHQLKGFERLKAVHLDPNPFDIERDLVTPTFKLKRPQLLK 641

Query: 207  YFKDHIDQLYSEAKKTKA 154
            Y+KD ID+LYSEAK TK+
Sbjct: 642  YYKDIIDRLYSEAKGTKS 659


>ref|XP_002313075.1| predicted protein [Populus trichocarpa] gi|222849483|gb|EEE87030.1|
            predicted protein [Populus trichocarpa]
          Length = 658

 Score =  437 bits (1125), Expect = e-120
 Identities = 211/258 (81%), Positives = 232/258 (89%)
 Frame = -1

Query: 927  LRVTSCSILSQGYGLTESCGGCFTSIANVFSMIGTVGVPGLTIEARLESVPEMGYDALST 748
            LRVTSCS LSQGYGLTESCGGCFTSI NV+ M+GTVGVP  TIE+RLESVPEMGYDALS+
Sbjct: 401  LRVTSCSTLSQGYGLTESCGGCFTSIGNVYPMVGTVGVPMTTIESRLESVPEMGYDALSS 460

Query: 747  VPRGEICLRGKTLFTGYHKRPDLTEEVVVDGWFHTGDIGEWQPNGAMKIIDRRKNIFKLS 568
            VPRGEICLRG TLF+GYHKR DLT EV+VDGWFHTGDIGEWQPNGAMKIIDR+KNIFKLS
Sbjct: 461  VPRGEICLRGSTLFSGYHKREDLTNEVLVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLS 520

Query: 567  QGEYVAVEKLENTFGQCPLITAIWVYGNSFESFLVAVVVPDRKALEDWAAAHHENGEFRS 388
            QGEYVAVE LEN + +CP IT+IWVYGNSFESFLVAVVVPDR+ALEDWAA H+E  +F+S
Sbjct: 521  QGEYVAVENLENVYLRCPHITSIWVYGNSFESFLVAVVVPDRQALEDWAANHNETDDFKS 580

Query: 387  MCENPKARKYILDELNSTGQKQKLKGFEMLRAVHLEPIPFDFERDLITPTFKLKRPQLLK 208
            +C+N KARKYILDELNS G+   L+GFEML+AVHLEP PFD ERDLITPTFKLKRPQLLK
Sbjct: 581  LCKNLKARKYILDELNSIGKTNNLRGFEMLKAVHLEPHPFDMERDLITPTFKLKRPQLLK 640

Query: 207  YFKDHIDQLYSEAKKTKA 154
             +KD IDQLYS+AK  KA
Sbjct: 641  CYKDCIDQLYSDAKGLKA 658


>ref|XP_004170472.1| PREDICTED: long chain acyl-CoA synthetase 2-like [Cucumis sativus]
          Length = 629

 Score =  436 bits (1120), Expect = e-120
 Identities = 205/257 (79%), Positives = 230/257 (89%)
 Frame = -1

Query: 927  LRVTSCSILSQGYGLTESCGGCFTSIANVFSMIGTVGVPGLTIEARLESVPEMGYDALST 748
            LRVTSC+ LSQGYGLTESCGGCFTSIANVF+M+GTVGVP  TIEARLESVP+MGYDAL+T
Sbjct: 372  LRVTSCATLSQGYGLTESCGGCFTSIANVFTMMGTVGVPVTTIEARLESVPDMGYDALAT 431

Query: 747  VPRGEICLRGKTLFTGYHKRPDLTEEVVVDGWFHTGDIGEWQPNGAMKIIDRRKNIFKLS 568
             PRGEICLRG TLF+GYHKR DLT EV++DGWFHTGDIGEWQP+G+MKIIDR+KNIFKLS
Sbjct: 432  TPRGEICLRGSTLFSGYHKRQDLTGEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLS 491

Query: 567  QGEYVAVEKLENTFGQCPLITAIWVYGNSFESFLVAVVVPDRKALEDWAAAHHENGEFRS 388
            QGEYVAVE +EN F QC LIT+IWVYGNSFESFLV V VPD+KALEDWA  H+  G+F+S
Sbjct: 492  QGEYVAVENIENIFLQCSLITSIWVYGNSFESFLVGVAVPDQKALEDWAQNHNMTGDFKS 551

Query: 387  MCENPKARKYILDELNSTGQKQKLKGFEMLRAVHLEPIPFDFERDLITPTFKLKRPQLLK 208
            +CEN KARKYILDELNS GQK  L+GFE+L+A+HLEP PFD ERDLITPTFKLKRPQLLK
Sbjct: 552  LCENLKARKYILDELNSNGQKHHLRGFELLKAIHLEPYPFDMERDLITPTFKLKRPQLLK 611

Query: 207  YFKDHIDQLYSEAKKTK 157
            Y+K+ ID+LY EAK  K
Sbjct: 612  YYKEQIDELYEEAKNAK 628


>ref|XP_004154333.1| PREDICTED: long chain acyl-CoA synthetase 2-like [Cucumis sativus]
          Length = 661

 Score =  436 bits (1120), Expect = e-120
 Identities = 205/257 (79%), Positives = 230/257 (89%)
 Frame = -1

Query: 927  LRVTSCSILSQGYGLTESCGGCFTSIANVFSMIGTVGVPGLTIEARLESVPEMGYDALST 748
            LRVTSC+ LSQGYGLTESCGGCFTSIANVF+M+GTVGVP  TIEARLESVP+MGYDAL+T
Sbjct: 404  LRVTSCATLSQGYGLTESCGGCFTSIANVFTMMGTVGVPVTTIEARLESVPDMGYDALAT 463

Query: 747  VPRGEICLRGKTLFTGYHKRPDLTEEVVVDGWFHTGDIGEWQPNGAMKIIDRRKNIFKLS 568
             PRGEICLRG TLF+GYHKR DLT EV++DGWFHTGDIGEWQP+G+MKIIDR+KNIFKLS
Sbjct: 464  TPRGEICLRGSTLFSGYHKRQDLTGEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLS 523

Query: 567  QGEYVAVEKLENTFGQCPLITAIWVYGNSFESFLVAVVVPDRKALEDWAAAHHENGEFRS 388
            QGEYVAVE +EN F QC LIT+IWVYGNSFESFLV V VPD+KALEDWA  H+  G+F+S
Sbjct: 524  QGEYVAVENIENIFLQCSLITSIWVYGNSFESFLVGVAVPDQKALEDWAQNHNMTGDFKS 583

Query: 387  MCENPKARKYILDELNSTGQKQKLKGFEMLRAVHLEPIPFDFERDLITPTFKLKRPQLLK 208
            +CEN KARKYILDELNS GQK  L+GFE+L+A+HLEP PFD ERDLITPTFKLKRPQLLK
Sbjct: 584  LCENLKARKYILDELNSNGQKHHLRGFELLKAIHLEPYPFDMERDLITPTFKLKRPQLLK 643

Query: 207  YFKDHIDQLYSEAKKTK 157
            Y+K+ ID+LY EAK  K
Sbjct: 644  YYKEQIDELYEEAKNAK 660


>ref|XP_004145346.1| PREDICTED: long chain acyl-CoA synthetase 2-like [Cucumis sativus]
          Length = 661

 Score =  436 bits (1120), Expect = e-120
 Identities = 205/257 (79%), Positives = 230/257 (89%)
 Frame = -1

Query: 927  LRVTSCSILSQGYGLTESCGGCFTSIANVFSMIGTVGVPGLTIEARLESVPEMGYDALST 748
            LRVTSC+ LSQGYGLTESCGGCFTSIANVF+M+GTVGVP  TIEARLESVP+MGYDAL+T
Sbjct: 404  LRVTSCATLSQGYGLTESCGGCFTSIANVFTMMGTVGVPVTTIEARLESVPDMGYDALAT 463

Query: 747  VPRGEICLRGKTLFTGYHKRPDLTEEVVVDGWFHTGDIGEWQPNGAMKIIDRRKNIFKLS 568
             PRGEICLRG TLF+GYHKR DLT EV++DGWFHTGDIGEWQP+G+MKIIDR+KNIFKLS
Sbjct: 464  TPRGEICLRGSTLFSGYHKRQDLTGEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLS 523

Query: 567  QGEYVAVEKLENTFGQCPLITAIWVYGNSFESFLVAVVVPDRKALEDWAAAHHENGEFRS 388
            QGEYVAVE +EN F QC LIT+IWVYGNSFESFLV V VPD+KALEDWA  H+  G+F+S
Sbjct: 524  QGEYVAVENIENIFLQCSLITSIWVYGNSFESFLVGVAVPDQKALEDWAQNHNMTGDFKS 583

Query: 387  MCENPKARKYILDELNSTGQKQKLKGFEMLRAVHLEPIPFDFERDLITPTFKLKRPQLLK 208
            +CEN KARKYILDELNS GQK  L+GFE+L+A+HLEP PFD ERDLITPTFKLKRPQLLK
Sbjct: 584  LCENLKARKYILDELNSNGQKHHLRGFELLKAIHLEPYPFDMERDLITPTFKLKRPQLLK 643

Query: 207  YFKDHIDQLYSEAKKTK 157
            Y+K+ ID+LY EAK  K
Sbjct: 644  YYKEQIDELYEEAKNAK 660


Top